Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6379 | 19360;19361;19362 | chr2:178728903;178728902;178728901 | chr2:179593630;179593629;179593628 |
N2AB | 6062 | 18409;18410;18411 | chr2:178728903;178728902;178728901 | chr2:179593630;179593629;179593628 |
N2A | 5135 | 15628;15629;15630 | chr2:178728903;178728902;178728901 | chr2:179593630;179593629;179593628 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs1448772446 | -1.776 | 1.0 | D | 0.839 | 0.568 | 0.741748209757 | gnomAD-2.1.1 | 4.18E-06 | None | None | None | None | N | None | 0 | 3.02E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
L/F | rs1448772446 | -1.776 | 1.0 | D | 0.839 | 0.568 | 0.741748209757 | gnomAD-4.0.0 | 1.38444E-06 | None | None | None | None | N | None | 0 | 2.30926E-05 | None | 0 | 0 | None | 0 | 0 | 9.07538E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9432 | likely_pathogenic | 0.9381 | pathogenic | -2.609 | Highly Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
L/C | 0.9182 | likely_pathogenic | 0.9043 | pathogenic | -2.017 | Highly Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
L/D | 0.9995 | likely_pathogenic | 0.9995 | pathogenic | -2.496 | Highly Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
L/E | 0.9967 | likely_pathogenic | 0.9959 | pathogenic | -2.229 | Highly Destabilizing | 1.0 | D | 0.91 | deleterious | None | None | None | None | N |
L/F | 0.6565 | likely_pathogenic | 0.676 | pathogenic | -1.561 | Destabilizing | 1.0 | D | 0.839 | deleterious | D | 0.523592679 | None | None | N |
L/G | 0.9912 | likely_pathogenic | 0.9907 | pathogenic | -3.203 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
L/H | 0.9835 | likely_pathogenic | 0.9799 | pathogenic | -2.617 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | D | 0.564195735 | None | None | N |
L/I | 0.2441 | likely_benign | 0.2206 | benign | -0.874 | Destabilizing | 0.999 | D | 0.579 | neutral | N | 0.511245188 | None | None | N |
L/K | 0.9959 | likely_pathogenic | 0.9948 | pathogenic | -1.835 | Destabilizing | 1.0 | D | 0.925 | deleterious | None | None | None | None | N |
L/M | 0.4084 | ambiguous | 0.3996 | ambiguous | -0.971 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
L/N | 0.9957 | likely_pathogenic | 0.995 | pathogenic | -2.252 | Highly Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
L/P | 0.9969 | likely_pathogenic | 0.9969 | pathogenic | -1.435 | Destabilizing | 1.0 | D | 0.916 | deleterious | D | 0.564195735 | None | None | N |
L/Q | 0.9776 | likely_pathogenic | 0.971 | pathogenic | -2.026 | Highly Destabilizing | 1.0 | D | 0.927 | deleterious | None | None | None | None | N |
L/R | 0.9878 | likely_pathogenic | 0.9848 | pathogenic | -1.71 | Destabilizing | 1.0 | D | 0.928 | deleterious | D | 0.564195735 | None | None | N |
L/S | 0.9853 | likely_pathogenic | 0.9833 | pathogenic | -3.066 | Highly Destabilizing | 1.0 | D | 0.924 | deleterious | None | None | None | None | N |
L/T | 0.9588 | likely_pathogenic | 0.9522 | pathogenic | -2.63 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
L/V | 0.2642 | likely_benign | 0.233 | benign | -1.435 | Destabilizing | 0.999 | D | 0.574 | neutral | N | 0.474410659 | None | None | N |
L/W | 0.9741 | likely_pathogenic | 0.9741 | pathogenic | -1.863 | Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
L/Y | 0.9753 | likely_pathogenic | 0.9762 | pathogenic | -1.6 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.