Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6381 | 19366;19367;19368 | chr2:178728897;178728896;178728895 | chr2:179593624;179593623;179593622 |
N2AB | 6064 | 18415;18416;18417 | chr2:178728897;178728896;178728895 | chr2:179593624;179593623;179593622 |
N2A | 5137 | 15634;15635;15636 | chr2:178728897;178728896;178728895 | chr2:179593624;179593623;179593622 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/E | rs983816997 | -0.762 | 0.982 | D | 0.654 | 0.772 | 0.9051856181 | gnomAD-2.1.1 | 4.21E-06 | None | None | None | None | N | None | 0 | 3.04E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/E | rs983816997 | -0.762 | 0.982 | D | 0.654 | 0.772 | 0.9051856181 | gnomAD-4.0.0 | 6.93177E-07 | None | None | None | None | N | None | 0 | 2.3175E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | None | None | 0.863 | N | 0.575 | 0.486 | 0.783258508602 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 6.17284E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5746 | likely_pathogenic | 0.636 | pathogenic | -1.863 | Destabilizing | 0.046 | N | 0.474 | neutral | D | 0.622000805 | None | None | N |
V/C | 0.9374 | likely_pathogenic | 0.9489 | pathogenic | -1.595 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
V/D | 0.9808 | likely_pathogenic | 0.9902 | pathogenic | -2.169 | Highly Destabilizing | 0.993 | D | 0.705 | prob.neutral | None | None | None | None | N |
V/E | 0.9351 | likely_pathogenic | 0.9638 | pathogenic | -2.116 | Highly Destabilizing | 0.982 | D | 0.654 | neutral | D | 0.65464494 | None | None | N |
V/F | 0.7091 | likely_pathogenic | 0.8155 | pathogenic | -1.382 | Destabilizing | 0.998 | D | 0.681 | prob.neutral | None | None | None | None | N |
V/G | 0.7517 | likely_pathogenic | 0.8234 | pathogenic | -2.218 | Highly Destabilizing | 0.964 | D | 0.67 | neutral | D | 0.65464494 | None | None | N |
V/H | 0.9791 | likely_pathogenic | 0.9891 | pathogenic | -1.66 | Destabilizing | 0.999 | D | 0.702 | prob.neutral | None | None | None | None | N |
V/I | 0.1167 | likely_benign | 0.1045 | benign | -0.952 | Destabilizing | 0.863 | D | 0.575 | neutral | N | 0.512498723 | None | None | N |
V/K | 0.9532 | likely_pathogenic | 0.9744 | pathogenic | -1.453 | Destabilizing | 0.986 | D | 0.658 | neutral | None | None | None | None | N |
V/L | 0.5787 | likely_pathogenic | 0.6044 | pathogenic | -0.952 | Destabilizing | 0.863 | D | 0.565 | neutral | D | 0.606981542 | None | None | N |
V/M | 0.5833 | likely_pathogenic | 0.6465 | pathogenic | -0.96 | Destabilizing | 0.998 | D | 0.706 | prob.neutral | None | None | None | None | N |
V/N | 0.935 | likely_pathogenic | 0.9577 | pathogenic | -1.44 | Destabilizing | 0.993 | D | 0.722 | prob.delet. | None | None | None | None | N |
V/P | 0.8989 | likely_pathogenic | 0.9165 | pathogenic | -1.225 | Destabilizing | 0.993 | D | 0.685 | prob.neutral | None | None | None | None | N |
V/Q | 0.9203 | likely_pathogenic | 0.9554 | pathogenic | -1.595 | Destabilizing | 0.993 | D | 0.697 | prob.neutral | None | None | None | None | N |
V/R | 0.9247 | likely_pathogenic | 0.9605 | pathogenic | -0.984 | Destabilizing | 0.993 | D | 0.722 | prob.delet. | None | None | None | None | N |
V/S | 0.7859 | likely_pathogenic | 0.8432 | pathogenic | -1.997 | Destabilizing | 0.973 | D | 0.629 | neutral | None | None | None | None | N |
V/T | 0.6452 | likely_pathogenic | 0.6708 | pathogenic | -1.835 | Destabilizing | 0.953 | D | 0.636 | neutral | None | None | None | None | N |
V/W | 0.9899 | likely_pathogenic | 0.9953 | pathogenic | -1.593 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | None | None | None | None | N |
V/Y | 0.9621 | likely_pathogenic | 0.9823 | pathogenic | -1.295 | Destabilizing | 0.998 | D | 0.687 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.