Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6390 | 19393;19394;19395 | chr2:178728758;178728757;178728756 | chr2:179593485;179593484;179593483 |
N2AB | 6073 | 18442;18443;18444 | chr2:178728758;178728757;178728756 | chr2:179593485;179593484;179593483 |
N2A | 5146 | 15661;15662;15663 | chr2:178728758;178728757;178728756 | chr2:179593485;179593484;179593483 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1220495372 | 0.308 | 0.977 | N | 0.572 | 0.38 | 0.390060412749 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 2.92E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/E | rs1220495372 | 0.308 | 0.977 | N | 0.572 | 0.38 | 0.390060412749 | gnomAD-4.0.0 | 1.62319E-06 | None | None | None | None | N | None | 0 | 2.30404E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.384 | ambiguous | 0.3846 | ambiguous | -0.142 | Destabilizing | 0.983 | D | 0.632 | neutral | None | None | None | None | N |
K/C | 0.8269 | likely_pathogenic | 0.8261 | pathogenic | -0.228 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
K/D | 0.6037 | likely_pathogenic | 0.6212 | pathogenic | 0.11 | Stabilizing | 0.998 | D | 0.766 | deleterious | None | None | None | None | N |
K/E | 0.1646 | likely_benign | 0.1787 | benign | 0.142 | Stabilizing | 0.977 | D | 0.572 | neutral | N | 0.492943718 | None | None | N |
K/F | 0.8128 | likely_pathogenic | 0.8134 | pathogenic | -0.19 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
K/G | 0.5527 | ambiguous | 0.5573 | ambiguous | -0.397 | Destabilizing | 0.998 | D | 0.643 | neutral | None | None | None | None | N |
K/H | 0.407 | ambiguous | 0.4017 | ambiguous | -0.753 | Destabilizing | 0.999 | D | 0.728 | prob.delet. | None | None | None | None | N |
K/I | 0.4488 | ambiguous | 0.4431 | ambiguous | 0.467 | Stabilizing | 0.997 | D | 0.759 | deleterious | N | 0.491239418 | None | None | N |
K/L | 0.437 | ambiguous | 0.4371 | ambiguous | 0.467 | Stabilizing | 0.995 | D | 0.643 | neutral | None | None | None | None | N |
K/M | 0.2433 | likely_benign | 0.2484 | benign | 0.284 | Stabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
K/N | 0.4314 | ambiguous | 0.4514 | ambiguous | 0.103 | Stabilizing | 0.993 | D | 0.697 | prob.neutral | N | 0.489063826 | None | None | N |
K/P | 0.5354 | ambiguous | 0.5243 | ambiguous | 0.293 | Stabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | N |
K/Q | 0.15 | likely_benign | 0.1471 | benign | -0.056 | Destabilizing | 0.993 | D | 0.687 | prob.neutral | N | 0.509817325 | None | None | N |
K/R | 0.0939 | likely_benign | 0.0946 | benign | -0.215 | Destabilizing | 0.235 | N | 0.261 | neutral | N | 0.502891353 | None | None | N |
K/S | 0.4886 | ambiguous | 0.5058 | ambiguous | -0.438 | Destabilizing | 0.983 | D | 0.637 | neutral | None | None | None | None | N |
K/T | 0.2046 | likely_benign | 0.2103 | benign | -0.238 | Destabilizing | 0.997 | D | 0.728 | prob.delet. | N | 0.486163763 | None | None | N |
K/V | 0.4086 | ambiguous | 0.4087 | ambiguous | 0.293 | Stabilizing | 0.998 | D | 0.741 | deleterious | None | None | None | None | N |
K/W | 0.8118 | likely_pathogenic | 0.8272 | pathogenic | -0.146 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
K/Y | 0.6588 | likely_pathogenic | 0.6706 | pathogenic | 0.182 | Stabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.