Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6391 | 19396;19397;19398 | chr2:178728755;178728754;178728753 | chr2:179593482;179593481;179593480 |
N2AB | 6074 | 18445;18446;18447 | chr2:178728755;178728754;178728753 | chr2:179593482;179593481;179593480 |
N2A | 5147 | 15664;15665;15666 | chr2:178728755;178728754;178728753 | chr2:179593482;179593481;179593480 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | None | None | 0.045 | N | 0.433 | 0.073 | 0.0666544352282 | gnomAD-4.0.0 | 3.24138E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.87075E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7162 | likely_pathogenic | 0.6342 | pathogenic | -0.775 | Destabilizing | 0.992 | D | 0.636 | neutral | None | None | None | None | N |
A/D | 0.8635 | likely_pathogenic | 0.8366 | pathogenic | -1.059 | Destabilizing | 0.549 | D | 0.685 | prob.neutral | N | 0.465366675 | None | None | N |
A/E | 0.7438 | likely_pathogenic | 0.7283 | pathogenic | -1.125 | Destabilizing | 0.617 | D | 0.656 | neutral | None | None | None | None | N |
A/F | 0.7838 | likely_pathogenic | 0.6856 | pathogenic | -1.042 | Destabilizing | 0.85 | D | 0.688 | prob.neutral | None | None | None | None | N |
A/G | 0.3026 | likely_benign | 0.2608 | benign | -1.043 | Destabilizing | 0.549 | D | 0.561 | neutral | N | 0.494996148 | None | None | N |
A/H | 0.9302 | likely_pathogenic | 0.8993 | pathogenic | -1.271 | Destabilizing | 0.992 | D | 0.649 | neutral | None | None | None | None | N |
A/I | 0.5244 | ambiguous | 0.4029 | ambiguous | -0.38 | Destabilizing | 0.739 | D | 0.721 | prob.delet. | None | None | None | None | N |
A/K | 0.9253 | likely_pathogenic | 0.9076 | pathogenic | -1.193 | Destabilizing | 0.617 | D | 0.655 | neutral | None | None | None | None | N |
A/L | 0.3814 | ambiguous | 0.2689 | benign | -0.38 | Destabilizing | 0.447 | N | 0.589 | neutral | None | None | None | None | N |
A/M | 0.435 | ambiguous | 0.3221 | benign | -0.251 | Destabilizing | 0.25 | N | 0.533 | neutral | None | None | None | None | N |
A/N | 0.7526 | likely_pathogenic | 0.6792 | pathogenic | -0.804 | Destabilizing | 0.85 | D | 0.703 | prob.neutral | None | None | None | None | N |
A/P | 0.2146 | likely_benign | 0.2031 | benign | -0.486 | Destabilizing | 0.002 | N | 0.383 | neutral | N | 0.311018479 | None | None | N |
A/Q | 0.7784 | likely_pathogenic | 0.7422 | pathogenic | -0.996 | Destabilizing | 0.92 | D | 0.715 | prob.delet. | None | None | None | None | N |
A/R | 0.8842 | likely_pathogenic | 0.865 | pathogenic | -0.816 | Destabilizing | 0.92 | D | 0.725 | prob.delet. | None | None | None | None | N |
A/S | 0.2181 | likely_benign | 0.1905 | benign | -1.102 | Destabilizing | 0.045 | N | 0.433 | neutral | N | 0.422018542 | None | None | N |
A/T | 0.176 | likely_benign | 0.1273 | benign | -1.077 | Destabilizing | 0.379 | N | 0.589 | neutral | N | 0.471580571 | None | None | N |
A/V | 0.2336 | likely_benign | 0.1826 | benign | -0.486 | Destabilizing | 0.379 | N | 0.584 | neutral | N | 0.461536936 | None | None | N |
A/W | 0.9509 | likely_pathogenic | 0.927 | pathogenic | -1.35 | Destabilizing | 0.992 | D | 0.709 | prob.delet. | None | None | None | None | N |
A/Y | 0.884 | likely_pathogenic | 0.829 | pathogenic | -0.969 | Destabilizing | 0.972 | D | 0.663 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.