Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6398 | 19417;19418;19419 | chr2:178728734;178728733;178728732 | chr2:179593461;179593460;179593459 |
N2AB | 6081 | 18466;18467;18468 | chr2:178728734;178728733;178728732 | chr2:179593461;179593460;179593459 |
N2A | 5154 | 15685;15686;15687 | chr2:178728734;178728733;178728732 | chr2:179593461;179593460;179593459 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs756732703 | -0.552 | 0.051 | N | 0.133 | 0.121 | 0.203808441222 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
E/A | rs756732703 | -0.552 | 0.051 | N | 0.133 | 0.121 | 0.203808441222 | gnomAD-4.0.0 | 4.81468E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.30911E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1949 | likely_benign | 0.1959 | benign | -0.681 | Destabilizing | 0.051 | N | 0.133 | neutral | N | 0.401472699 | None | None | N |
E/C | 0.951 | likely_pathogenic | 0.9371 | pathogenic | -0.285 | Destabilizing | 0.998 | D | 0.334 | neutral | None | None | None | None | N |
E/D | 0.3742 | ambiguous | 0.365 | ambiguous | -0.816 | Destabilizing | 0.012 | N | 0.167 | neutral | N | 0.453731103 | None | None | N |
E/F | 0.9023 | likely_pathogenic | 0.9073 | pathogenic | -0.343 | Destabilizing | 0.974 | D | 0.349 | neutral | None | None | None | None | N |
E/G | 0.2587 | likely_benign | 0.2485 | benign | -0.984 | Destabilizing | 0.669 | D | 0.368 | neutral | N | 0.482246748 | None | None | N |
E/H | 0.7916 | likely_pathogenic | 0.7771 | pathogenic | -0.515 | Destabilizing | 0.991 | D | 0.292 | neutral | None | None | None | None | N |
E/I | 0.5349 | ambiguous | 0.5364 | ambiguous | 0.124 | Stabilizing | 0.728 | D | 0.392 | neutral | None | None | None | None | N |
E/K | 0.2504 | likely_benign | 0.2265 | benign | -0.306 | Destabilizing | 0.801 | D | 0.374 | neutral | N | 0.464177383 | None | None | N |
E/L | 0.5801 | likely_pathogenic | 0.6021 | pathogenic | 0.124 | Stabilizing | 0.728 | D | 0.394 | neutral | None | None | None | None | N |
E/M | 0.6211 | likely_pathogenic | 0.6351 | pathogenic | 0.437 | Stabilizing | 0.974 | D | 0.325 | neutral | None | None | None | None | N |
E/N | 0.5829 | likely_pathogenic | 0.5711 | pathogenic | -0.669 | Destabilizing | 0.728 | D | 0.349 | neutral | None | None | None | None | N |
E/P | 0.8034 | likely_pathogenic | 0.7343 | pathogenic | -0.123 | Destabilizing | 0.974 | D | 0.315 | neutral | None | None | None | None | N |
E/Q | 0.2145 | likely_benign | 0.2056 | benign | -0.583 | Destabilizing | 0.891 | D | 0.383 | neutral | N | 0.45715541 | None | None | N |
E/R | 0.4287 | ambiguous | 0.4018 | ambiguous | -0.068 | Destabilizing | 0.974 | D | 0.328 | neutral | None | None | None | None | N |
E/S | 0.3409 | ambiguous | 0.3533 | ambiguous | -0.914 | Destabilizing | 0.728 | D | 0.348 | neutral | None | None | None | None | N |
E/T | 0.4691 | ambiguous | 0.4501 | ambiguous | -0.671 | Destabilizing | 0.842 | D | 0.371 | neutral | None | None | None | None | N |
E/V | 0.3112 | likely_benign | 0.3171 | benign | -0.123 | Destabilizing | 0.022 | N | 0.14 | neutral | N | 0.428331226 | None | None | N |
E/W | 0.961 | likely_pathogenic | 0.9618 | pathogenic | -0.142 | Destabilizing | 0.998 | D | 0.501 | neutral | None | None | None | None | N |
E/Y | 0.8509 | likely_pathogenic | 0.8563 | pathogenic | -0.106 | Destabilizing | 0.991 | D | 0.33 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.