Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6401 | 19426;19427;19428 | chr2:178728725;178728724;178728723 | chr2:179593452;179593451;179593450 |
N2AB | 6084 | 18475;18476;18477 | chr2:178728725;178728724;178728723 | chr2:179593452;179593451;179593450 |
N2A | 5157 | 15694;15695;15696 | chr2:178728725;178728724;178728723 | chr2:179593452;179593451;179593450 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs779496338 | -0.256 | 0.998 | N | 0.733 | 0.327 | 0.499665682712 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
P/L | rs779496338 | -0.256 | 0.998 | N | 0.733 | 0.327 | 0.499665682712 | gnomAD-4.0.0 | 1.59847E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4348E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1095 | likely_benign | 0.1357 | benign | -1.263 | Destabilizing | 0.996 | D | 0.579 | neutral | N | 0.48941697 | None | None | N |
P/C | 0.7266 | likely_pathogenic | 0.7593 | pathogenic | -0.892 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
P/D | 0.6432 | likely_pathogenic | 0.711 | pathogenic | -1.099 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
P/E | 0.4674 | ambiguous | 0.521 | ambiguous | -1.147 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
P/F | 0.5724 | likely_pathogenic | 0.6548 | pathogenic | -1.126 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
P/G | 0.4896 | ambiguous | 0.5833 | pathogenic | -1.524 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
P/H | 0.3388 | likely_benign | 0.3956 | ambiguous | -0.987 | Destabilizing | 1.0 | D | 0.813 | deleterious | N | 0.472088076 | None | None | N |
P/I | 0.4104 | ambiguous | 0.4454 | ambiguous | -0.671 | Destabilizing | 0.998 | D | 0.768 | deleterious | None | None | None | None | N |
P/K | 0.5342 | ambiguous | 0.5874 | pathogenic | -0.956 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
P/L | 0.1793 | likely_benign | 0.213 | benign | -0.671 | Destabilizing | 0.998 | D | 0.733 | prob.delet. | N | 0.467795661 | None | None | N |
P/M | 0.3995 | ambiguous | 0.4525 | ambiguous | -0.475 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
P/N | 0.4819 | ambiguous | 0.561 | ambiguous | -0.71 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
P/Q | 0.2854 | likely_benign | 0.3379 | benign | -0.967 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
P/R | 0.3393 | likely_benign | 0.3912 | ambiguous | -0.364 | Destabilizing | 1.0 | D | 0.855 | deleterious | N | 0.509714885 | None | None | N |
P/S | 0.1651 | likely_benign | 0.2165 | benign | -1.203 | Destabilizing | 0.999 | D | 0.805 | deleterious | N | 0.450183792 | None | None | N |
P/T | 0.135 | likely_benign | 0.1672 | benign | -1.148 | Destabilizing | 0.999 | D | 0.75 | deleterious | N | 0.44793292 | None | None | N |
P/V | 0.2846 | likely_benign | 0.326 | benign | -0.833 | Destabilizing | 0.91 | D | 0.391 | neutral | None | None | None | None | N |
P/W | 0.7792 | likely_pathogenic | 0.8406 | pathogenic | -1.235 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
P/Y | 0.5993 | likely_pathogenic | 0.6695 | pathogenic | -0.952 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.