Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6404 | 19435;19436;19437 | chr2:178728716;178728715;178728714 | chr2:179593443;179593442;179593441 |
N2AB | 6087 | 18484;18485;18486 | chr2:178728716;178728715;178728714 | chr2:179593443;179593442;179593441 |
N2A | 5160 | 15703;15704;15705 | chr2:178728716;178728715;178728714 | chr2:179593443;179593442;179593441 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | None | None | 0.999 | D | 0.867 | 0.819 | 0.917040579573 | gnomAD-4.0.0 | 2.05425E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.7006E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8637 | likely_pathogenic | 0.8649 | pathogenic | -2.537 | Highly Destabilizing | 0.992 | D | 0.742 | deleterious | None | None | None | None | N |
L/C | 0.9288 | likely_pathogenic | 0.9328 | pathogenic | -1.984 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
L/D | 0.9975 | likely_pathogenic | 0.9978 | pathogenic | -3.273 | Highly Destabilizing | 0.999 | D | 0.891 | deleterious | None | None | None | None | N |
L/E | 0.9818 | likely_pathogenic | 0.9845 | pathogenic | -2.954 | Highly Destabilizing | 0.999 | D | 0.891 | deleterious | None | None | None | None | N |
L/F | 0.1807 | likely_benign | 0.1632 | benign | -1.405 | Destabilizing | 0.121 | N | 0.335 | neutral | D | 0.524189345 | None | None | N |
L/G | 0.9806 | likely_pathogenic | 0.9815 | pathogenic | -3.167 | Highly Destabilizing | 0.999 | D | 0.885 | deleterious | None | None | None | None | N |
L/H | 0.9415 | likely_pathogenic | 0.9468 | pathogenic | -2.858 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
L/I | 0.1561 | likely_benign | 0.1417 | benign | -0.655 | Destabilizing | 0.983 | D | 0.605 | neutral | None | None | None | None | N |
L/K | 0.9685 | likely_pathogenic | 0.9735 | pathogenic | -1.887 | Destabilizing | 0.999 | D | 0.878 | deleterious | None | None | None | None | N |
L/M | 0.1723 | likely_benign | 0.1639 | benign | -0.912 | Destabilizing | 0.999 | D | 0.663 | neutral | D | 0.574773171 | None | None | N |
L/N | 0.9891 | likely_pathogenic | 0.9892 | pathogenic | -2.546 | Highly Destabilizing | 0.999 | D | 0.895 | deleterious | None | None | None | None | N |
L/P | 0.9903 | likely_pathogenic | 0.9939 | pathogenic | -1.272 | Destabilizing | 0.999 | D | 0.892 | deleterious | None | None | None | None | N |
L/Q | 0.9221 | likely_pathogenic | 0.9301 | pathogenic | -2.214 | Highly Destabilizing | 0.999 | D | 0.893 | deleterious | None | None | None | None | N |
L/R | 0.9432 | likely_pathogenic | 0.9556 | pathogenic | -1.969 | Destabilizing | 0.999 | D | 0.879 | deleterious | None | None | None | None | N |
L/S | 0.9657 | likely_pathogenic | 0.9656 | pathogenic | -3.171 | Highly Destabilizing | 0.999 | D | 0.867 | deleterious | D | 0.645633392 | None | None | N |
L/T | 0.8995 | likely_pathogenic | 0.8965 | pathogenic | -2.678 | Highly Destabilizing | 0.999 | D | 0.773 | deleterious | None | None | None | None | N |
L/V | 0.2022 | likely_benign | 0.1964 | benign | -1.272 | Destabilizing | 0.978 | D | 0.647 | neutral | D | 0.607245862 | None | None | N |
L/W | 0.6019 | likely_pathogenic | 0.6227 | pathogenic | -1.843 | Destabilizing | 1.0 | D | 0.871 | deleterious | D | 0.62009528 | None | None | N |
L/Y | 0.8197 | likely_pathogenic | 0.8171 | pathogenic | -1.582 | Destabilizing | 0.99 | D | 0.773 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.