Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6408 | 19447;19448;19449 | chr2:178728704;178728703;178728702 | chr2:179593431;179593430;179593429 |
N2AB | 6091 | 18496;18497;18498 | chr2:178728704;178728703;178728702 | chr2:179593431;179593430;179593429 |
N2A | 5164 | 15715;15716;15717 | chr2:178728704;178728703;178728702 | chr2:179593431;179593430;179593429 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.999 | D | 0.613 | 0.612 | 0.706496497531 | gnomAD-4.0.0 | 6.84496E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15966E-05 | 0 |
V/G | None | None | 1.0 | D | 0.857 | 0.836 | 0.882822177023 | gnomAD-4.0.0 | 1.36899E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79961E-06 | 0 | 0 |
V/M | rs2154306642 | None | 1.0 | D | 0.767 | 0.589 | 0.739150905744 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5739 | likely_pathogenic | 0.5155 | ambiguous | -1.965 | Destabilizing | 0.999 | D | 0.613 | neutral | D | 0.535838851 | None | None | N |
V/C | 0.9768 | likely_pathogenic | 0.9781 | pathogenic | -1.422 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
V/D | 0.9968 | likely_pathogenic | 0.998 | pathogenic | -2.761 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
V/E | 0.9892 | likely_pathogenic | 0.9922 | pathogenic | -2.506 | Highly Destabilizing | 1.0 | D | 0.862 | deleterious | D | 0.631733873 | None | None | N |
V/F | 0.8005 | likely_pathogenic | 0.8032 | pathogenic | -1.162 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
V/G | 0.8837 | likely_pathogenic | 0.9031 | pathogenic | -2.535 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | D | 0.57415704 | None | None | N |
V/H | 0.9967 | likely_pathogenic | 0.9977 | pathogenic | -2.421 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
V/I | 0.1478 | likely_benign | 0.1436 | benign | -0.359 | Destabilizing | 0.998 | D | 0.539 | neutral | None | None | None | None | N |
V/K | 0.9934 | likely_pathogenic | 0.9956 | pathogenic | -1.715 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
V/L | 0.7087 | likely_pathogenic | 0.7347 | pathogenic | -0.359 | Destabilizing | 0.997 | D | 0.629 | neutral | D | 0.544248878 | None | None | N |
V/M | 0.7296 | likely_pathogenic | 0.7229 | pathogenic | -0.381 | Destabilizing | 1.0 | D | 0.767 | deleterious | D | 0.631330265 | None | None | N |
V/N | 0.9928 | likely_pathogenic | 0.9946 | pathogenic | -2.167 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
V/P | 0.9859 | likely_pathogenic | 0.9909 | pathogenic | -0.868 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
V/Q | 0.9895 | likely_pathogenic | 0.9915 | pathogenic | -1.934 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
V/R | 0.9847 | likely_pathogenic | 0.9897 | pathogenic | -1.647 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
V/S | 0.9149 | likely_pathogenic | 0.9126 | pathogenic | -2.745 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
V/T | 0.7318 | likely_pathogenic | 0.7035 | pathogenic | -2.339 | Highly Destabilizing | 0.999 | D | 0.611 | neutral | None | None | None | None | N |
V/W | 0.9973 | likely_pathogenic | 0.998 | pathogenic | -1.784 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
V/Y | 0.989 | likely_pathogenic | 0.9905 | pathogenic | -1.335 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.