Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6417 | 19474;19475;19476 | chr2:178728677;178728676;178728675 | chr2:179593404;179593403;179593402 |
N2AB | 6100 | 18523;18524;18525 | chr2:178728677;178728676;178728675 | chr2:179593404;179593403;179593402 |
N2A | 5173 | 15742;15743;15744 | chr2:178728677;178728676;178728675 | chr2:179593404;179593403;179593402 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs771838033 | -0.252 | 0.939 | D | 0.493 | 0.292 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
K/E | rs771838033 | -0.252 | 0.939 | D | 0.493 | 0.292 | None | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
K/E | rs771838033 | -0.252 | 0.939 | D | 0.493 | 0.292 | None | gnomAD-4.0.0 | 3.71904E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.08644E-06 | 0 | 0 |
K/T | None | None | 0.991 | N | 0.676 | 0.327 | 0.444706120422 | gnomAD-4.0.0 | 6.84403E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9963E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4557 | ambiguous | 0.3878 | ambiguous | -1.037 | Destabilizing | 0.953 | D | 0.551 | neutral | None | None | None | None | N |
K/C | 0.7438 | likely_pathogenic | 0.7276 | pathogenic | -0.969 | Destabilizing | 0.999 | D | 0.736 | prob.delet. | None | None | None | None | N |
K/D | 0.7987 | likely_pathogenic | 0.7022 | pathogenic | -1.062 | Destabilizing | 0.993 | D | 0.692 | prob.neutral | None | None | None | None | N |
K/E | 0.295 | likely_benign | 0.2005 | benign | -0.838 | Destabilizing | 0.939 | D | 0.493 | neutral | D | 0.529208375 | None | None | N |
K/F | 0.8134 | likely_pathogenic | 0.763 | pathogenic | -0.17 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
K/G | 0.6512 | likely_pathogenic | 0.6023 | pathogenic | -1.498 | Destabilizing | 0.993 | D | 0.683 | prob.neutral | None | None | None | None | N |
K/H | 0.3182 | likely_benign | 0.2954 | benign | -1.487 | Destabilizing | 0.998 | D | 0.707 | prob.neutral | None | None | None | None | N |
K/I | 0.402 | ambiguous | 0.3209 | benign | 0.234 | Stabilizing | 0.991 | D | 0.737 | prob.delet. | N | 0.486746421 | None | None | N |
K/L | 0.43 | ambiguous | 0.3658 | ambiguous | 0.234 | Stabilizing | 0.986 | D | 0.683 | prob.neutral | None | None | None | None | N |
K/M | 0.2598 | likely_benign | 0.2109 | benign | -0.04 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | N |
K/N | 0.56 | ambiguous | 0.4516 | ambiguous | -1.368 | Destabilizing | 0.982 | D | 0.609 | neutral | N | 0.498570026 | None | None | N |
K/P | 0.9789 | likely_pathogenic | 0.9699 | pathogenic | -0.164 | Destabilizing | 0.998 | D | 0.703 | prob.neutral | None | None | None | None | N |
K/Q | 0.127 | likely_benign | 0.11 | benign | -1.167 | Destabilizing | 0.982 | D | 0.608 | neutral | D | 0.529152447 | None | None | N |
K/R | 0.0877 | likely_benign | 0.0875 | benign | -1.053 | Destabilizing | 0.046 | N | 0.285 | neutral | N | 0.496906743 | None | None | N |
K/S | 0.4579 | ambiguous | 0.3889 | ambiguous | -1.917 | Destabilizing | 0.953 | D | 0.555 | neutral | None | None | None | None | N |
K/T | 0.1783 | likely_benign | 0.1392 | benign | -1.46 | Destabilizing | 0.991 | D | 0.676 | prob.neutral | N | 0.498117464 | None | None | N |
K/V | 0.3732 | ambiguous | 0.3174 | benign | -0.164 | Destabilizing | 0.993 | D | 0.695 | prob.neutral | None | None | None | None | N |
K/W | 0.7738 | likely_pathogenic | 0.7596 | pathogenic | -0.148 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | N |
K/Y | 0.6674 | likely_pathogenic | 0.6157 | pathogenic | 0.093 | Stabilizing | 0.998 | D | 0.73 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.