Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC641919480;19481;19482 chr2:178728671;178728670;178728669chr2:179593398;179593397;179593396
N2AB610218529;18530;18531 chr2:178728671;178728670;178728669chr2:179593398;179593397;179593396
N2A517515748;15749;15750 chr2:178728671;178728670;178728669chr2:179593398;179593397;179593396
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Ig-48
  • Domain position: 35
  • Structural Position: 49
  • Q(SASA): 0.1742
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F None None 0.002 N 0.222 0.1 0.277317399466 gnomAD-4.0.0 1.20032E-06 None None None None N None 6.33473E-05 0 None 0 0 None 0 0 0 0 0
L/R None None 0.004 N 0.515 0.229 0.645662332294 gnomAD-4.0.0 3.1847E-06 None None None None N None 0 0 None 0 0 None 0 0 5.71981E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.407 ambiguous 0.3651 ambiguous -2.411 Highly Destabilizing 0.129 N 0.481 neutral None None None None N
L/C 0.4746 ambiguous 0.4264 ambiguous -1.721 Destabilizing 0.983 D 0.541 neutral None None None None N
L/D 0.7604 likely_pathogenic 0.7023 pathogenic -2.393 Highly Destabilizing 0.716 D 0.605 neutral None None None None N
L/E 0.3237 likely_benign 0.2997 benign -2.257 Highly Destabilizing 0.418 N 0.585 neutral None None None None N
L/F 0.0704 likely_benign 0.0607 benign -1.517 Destabilizing 0.002 N 0.222 neutral N 0.395023942 None None N
L/G 0.6585 likely_pathogenic 0.6166 pathogenic -2.873 Highly Destabilizing 0.418 N 0.564 neutral None None None None N
L/H 0.1965 likely_benign 0.1593 benign -2.171 Highly Destabilizing 0.655 D 0.593 neutral N 0.454441574 None None N
L/I 0.1358 likely_benign 0.1161 benign -1.121 Destabilizing 0.213 N 0.437 neutral N 0.455642889 None None N
L/K 0.3505 ambiguous 0.304 benign -1.787 Destabilizing 0.264 N 0.524 neutral None None None None N
L/M 0.0938 likely_benign 0.0897 benign -1.024 Destabilizing 0.061 N 0.371 neutral None None None None N
L/N 0.4278 ambiguous 0.3805 ambiguous -1.883 Destabilizing 0.716 D 0.612 neutral None None None None N
L/P 0.9854 likely_pathogenic 0.9762 pathogenic -1.528 Destabilizing 0.794 D 0.597 neutral N 0.498145276 None None N
L/Q 0.1319 likely_benign 0.1211 benign -1.903 Destabilizing 0.716 D 0.575 neutral None None None None N
L/R 0.2552 likely_benign 0.2241 benign -1.319 Destabilizing 0.004 N 0.515 neutral N 0.507061369 None None N
L/S 0.3 likely_benign 0.2527 benign -2.585 Highly Destabilizing 0.027 N 0.533 neutral None None None None N
L/T 0.2621 likely_benign 0.2323 benign -2.321 Highly Destabilizing 0.01 N 0.449 neutral None None None None N
L/V 0.1269 likely_benign 0.1117 benign -1.528 Destabilizing 0.101 N 0.44 neutral N 0.514699417 None None N
L/W 0.1392 likely_benign 0.1149 benign -1.78 Destabilizing 0.951 D 0.556 neutral None None None None N
L/Y 0.1836 likely_benign 0.1569 benign -1.535 Destabilizing 0.002 N 0.442 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.