Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6420 | 19483;19484;19485 | chr2:178728668;178728667;178728666 | chr2:179593395;179593394;179593393 |
N2AB | 6103 | 18532;18533;18534 | chr2:178728668;178728667;178728666 | chr2:179593395;179593394;179593393 |
N2A | 5176 | 15751;15752;15753 | chr2:178728668;178728667;178728666 | chr2:179593395;179593394;179593393 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 1.0 | D | 0.727 | 0.523 | 0.30921473904 | gnomAD-4.0.0 | 6.84418E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9964E-07 | 0 | 0 |
K/Q | None | None | 1.0 | N | 0.719 | 0.554 | 0.357724736475 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
K/T | None | None | 1.0 | N | 0.767 | 0.485 | 0.503002171853 | gnomAD-4.0.0 | 3.18468E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86623E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9485 | likely_pathogenic | 0.9488 | pathogenic | -1.033 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | N |
K/C | 0.9463 | likely_pathogenic | 0.9468 | pathogenic | -1.013 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
K/D | 0.9916 | likely_pathogenic | 0.9918 | pathogenic | -0.071 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
K/E | 0.8583 | likely_pathogenic | 0.8497 | pathogenic | 0.102 | Stabilizing | 0.999 | D | 0.629 | neutral | D | 0.543439729 | None | None | N |
K/F | 0.9649 | likely_pathogenic | 0.9595 | pathogenic | -0.683 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
K/G | 0.9723 | likely_pathogenic | 0.9773 | pathogenic | -1.432 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
K/H | 0.637 | likely_pathogenic | 0.6187 | pathogenic | -1.598 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
K/I | 0.8878 | likely_pathogenic | 0.8663 | pathogenic | 0.029 | Stabilizing | 1.0 | D | 0.869 | deleterious | D | 0.524068026 | None | None | N |
K/L | 0.8166 | likely_pathogenic | 0.808 | pathogenic | 0.029 | Stabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
K/M | 0.7321 | likely_pathogenic | 0.6995 | pathogenic | -0.126 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
K/N | 0.9638 | likely_pathogenic | 0.9582 | pathogenic | -0.715 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | D | 0.53166535 | None | None | N |
K/P | 0.9962 | likely_pathogenic | 0.9966 | pathogenic | -0.297 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
K/Q | 0.5008 | ambiguous | 0.4809 | ambiguous | -0.672 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | N | 0.510585353 | None | None | N |
K/R | 0.1106 | likely_benign | 0.1129 | benign | -0.562 | Destabilizing | 0.999 | D | 0.67 | neutral | N | 0.51299005 | None | None | N |
K/S | 0.9695 | likely_pathogenic | 0.9703 | pathogenic | -1.526 | Destabilizing | 0.999 | D | 0.639 | neutral | None | None | None | None | N |
K/T | 0.9244 | likely_pathogenic | 0.9232 | pathogenic | -1.109 | Destabilizing | 1.0 | D | 0.767 | deleterious | N | 0.513472189 | None | None | N |
K/V | 0.8713 | likely_pathogenic | 0.8504 | pathogenic | -0.297 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
K/W | 0.921 | likely_pathogenic | 0.9276 | pathogenic | -0.492 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
K/Y | 0.8938 | likely_pathogenic | 0.8902 | pathogenic | -0.204 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.