Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6423 | 19492;19493;19494 | chr2:178728659;178728658;178728657 | chr2:179593386;179593385;179593384 |
N2AB | 6106 | 18541;18542;18543 | chr2:178728659;178728658;178728657 | chr2:179593386;179593385;179593384 |
N2A | 5179 | 15760;15761;15762 | chr2:178728659;178728658;178728657 | chr2:179593386;179593385;179593384 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs771317701 | 0.511 | 0.013 | N | 0.239 | 0.24 | 0.323886383625 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.59E-05 | None | 0 | None | 0 | 0 | 0 |
K/E | rs771317701 | 0.511 | 0.013 | N | 0.239 | 0.24 | 0.323886383625 | gnomAD-4.0.0 | 1.59238E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77716E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5082 | ambiguous | 0.4071 | ambiguous | 0.048 | Stabilizing | 0.575 | D | 0.477 | neutral | None | None | None | None | N |
K/C | 0.7468 | likely_pathogenic | 0.6911 | pathogenic | -0.3 | Destabilizing | 0.991 | D | 0.645 | neutral | None | None | None | None | N |
K/D | 0.7099 | likely_pathogenic | 0.5426 | ambiguous | -0.033 | Destabilizing | 0.404 | N | 0.441 | neutral | None | None | None | None | N |
K/E | 0.2252 | likely_benign | 0.1415 | benign | -0.023 | Destabilizing | 0.013 | N | 0.239 | neutral | N | 0.513182917 | None | None | N |
K/F | 0.7692 | likely_pathogenic | 0.6639 | pathogenic | -0.155 | Destabilizing | 0.906 | D | 0.598 | neutral | None | None | None | None | N |
K/G | 0.6289 | likely_pathogenic | 0.5276 | ambiguous | -0.142 | Destabilizing | 0.575 | D | 0.436 | neutral | None | None | None | None | N |
K/H | 0.3044 | likely_benign | 0.2609 | benign | -0.325 | Destabilizing | 0.973 | D | 0.486 | neutral | None | None | None | None | N |
K/I | 0.343 | ambiguous | 0.2457 | benign | 0.471 | Stabilizing | 0.879 | D | 0.604 | neutral | N | 0.489241636 | None | None | N |
K/L | 0.4043 | ambiguous | 0.3134 | benign | 0.471 | Stabilizing | 0.826 | D | 0.439 | neutral | None | None | None | None | N |
K/M | 0.2774 | likely_benign | 0.2123 | benign | 0.118 | Stabilizing | 0.991 | D | 0.496 | neutral | None | None | None | None | N |
K/N | 0.4637 | ambiguous | 0.3146 | benign | 0.096 | Stabilizing | 0.782 | D | 0.395 | neutral | N | 0.505931658 | None | None | N |
K/P | 0.9526 | likely_pathogenic | 0.9397 | pathogenic | 0.357 | Stabilizing | 0.906 | D | 0.479 | neutral | None | None | None | None | N |
K/Q | 0.12 | likely_benign | 0.0998 | benign | -0.032 | Destabilizing | 0.782 | D | 0.439 | neutral | N | 0.483918803 | None | None | N |
K/R | 0.0732 | likely_benign | 0.076 | benign | -0.086 | Destabilizing | 0.003 | N | 0.222 | neutral | N | 0.459524578 | None | None | N |
K/S | 0.5021 | ambiguous | 0.3902 | ambiguous | -0.334 | Destabilizing | 0.575 | D | 0.446 | neutral | None | None | None | None | N |
K/T | 0.2539 | likely_benign | 0.1895 | benign | -0.18 | Destabilizing | 0.782 | D | 0.422 | neutral | D | 0.533232902 | None | None | N |
K/V | 0.3409 | ambiguous | 0.2522 | benign | 0.357 | Stabilizing | 0.826 | D | 0.514 | neutral | None | None | None | None | N |
K/W | 0.7456 | likely_pathogenic | 0.7052 | pathogenic | -0.218 | Destabilizing | 0.991 | D | 0.671 | neutral | None | None | None | None | N |
K/Y | 0.6184 | likely_pathogenic | 0.5244 | ambiguous | 0.135 | Stabilizing | 0.906 | D | 0.559 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.