Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6424 | 19495;19496;19497 | chr2:178728656;178728655;178728654 | chr2:179593383;179593382;179593381 |
N2AB | 6107 | 18544;18545;18546 | chr2:178728656;178728655;178728654 | chr2:179593383;179593382;179593381 |
N2A | 5180 | 15763;15764;15765 | chr2:178728656;178728655;178728654 | chr2:179593383;179593382;179593381 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | rs749497096 | -0.043 | 0.822 | N | 0.313 | 0.184 | 0.251116650651 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
Q/H | rs749497096 | -0.043 | 0.822 | N | 0.313 | 0.184 | 0.251116650651 | gnomAD-4.0.0 | 1.59234E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43312E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1406 | likely_benign | 0.1428 | benign | -0.293 | Destabilizing | 0.002 | N | 0.184 | neutral | None | None | None | None | N |
Q/C | 0.7524 | likely_pathogenic | 0.681 | pathogenic | 0.049 | Stabilizing | 0.958 | D | 0.293 | neutral | None | None | None | None | N |
Q/D | 0.4285 | ambiguous | 0.3509 | ambiguous | 0.01 | Stabilizing | 0.055 | N | 0.211 | neutral | None | None | None | None | N |
Q/E | 0.0727 | likely_benign | 0.0612 | benign | 0.038 | Stabilizing | 0.001 | N | 0.165 | neutral | N | 0.327458596 | None | None | N |
Q/F | 0.7241 | likely_pathogenic | 0.6581 | pathogenic | -0.231 | Destabilizing | 0.497 | N | 0.325 | neutral | None | None | None | None | N |
Q/G | 0.3383 | likely_benign | 0.3006 | benign | -0.555 | Destabilizing | 0.104 | N | 0.343 | neutral | None | None | None | None | N |
Q/H | 0.292 | likely_benign | 0.248 | benign | -0.319 | Destabilizing | 0.822 | D | 0.313 | neutral | N | 0.474261957 | None | None | N |
Q/I | 0.3088 | likely_benign | 0.2656 | benign | 0.33 | Stabilizing | 0.124 | N | 0.372 | neutral | None | None | None | None | N |
Q/K | 0.149 | likely_benign | 0.1112 | benign | -0.138 | Destabilizing | 0.081 | N | 0.238 | neutral | N | 0.439415877 | None | None | N |
Q/L | 0.1265 | likely_benign | 0.109 | benign | 0.33 | Stabilizing | None | N | 0.215 | neutral | N | 0.427950877 | None | None | N |
Q/M | 0.2764 | likely_benign | 0.2651 | benign | 0.404 | Stabilizing | 0.497 | N | 0.298 | neutral | None | None | None | None | N |
Q/N | 0.2992 | likely_benign | 0.2711 | benign | -0.542 | Destabilizing | 0.364 | N | 0.205 | neutral | None | None | None | None | N |
Q/P | 0.0645 | likely_benign | 0.0629 | benign | 0.153 | Stabilizing | None | N | 0.183 | neutral | N | 0.379156852 | None | None | N |
Q/R | 0.1774 | likely_benign | 0.1416 | benign | None | Stabilizing | 0.175 | N | 0.229 | neutral | N | 0.440976102 | None | None | N |
Q/S | 0.2296 | likely_benign | 0.2269 | benign | -0.56 | Destabilizing | 0.055 | N | 0.22 | neutral | None | None | None | None | N |
Q/T | 0.1661 | likely_benign | 0.1587 | benign | -0.362 | Destabilizing | 0.104 | N | 0.307 | neutral | None | None | None | None | N |
Q/V | 0.183 | likely_benign | 0.1667 | benign | 0.153 | Stabilizing | 0.055 | N | 0.343 | neutral | None | None | None | None | N |
Q/W | 0.6306 | likely_pathogenic | 0.5197 | ambiguous | -0.195 | Destabilizing | 0.958 | D | 0.309 | neutral | None | None | None | None | N |
Q/Y | 0.5444 | ambiguous | 0.4509 | ambiguous | 0.039 | Stabilizing | 0.859 | D | 0.333 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.