Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6430 | 19513;19514;19515 | chr2:178728638;178728637;178728636 | chr2:179593365;179593364;179593363 |
N2AB | 6113 | 18562;18563;18564 | chr2:178728638;178728637;178728636 | chr2:179593365;179593364;179593363 |
N2A | 5186 | 15781;15782;15783 | chr2:178728638;178728637;178728636 | chr2:179593365;179593364;179593363 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs781726929 | -0.198 | 0.997 | N | 0.363 | 0.423 | 0.430808444494 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.23989E-04 | None | 0 | None | 0 | 0 | 0 |
Y/C | rs781726929 | -0.198 | 0.997 | N | 0.363 | 0.423 | 0.430808444494 | gnomAD-4.0.0 | 2.7377E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.04898E-05 | None | 0 | 0 | 1.79923E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.6401 | likely_pathogenic | 0.5933 | pathogenic | -1.993 | Destabilizing | 0.688 | D | 0.315 | neutral | None | None | None | None | N |
Y/C | 0.3032 | likely_benign | 0.2583 | benign | -0.959 | Destabilizing | 0.997 | D | 0.363 | neutral | N | 0.509906886 | None | None | N |
Y/D | 0.4251 | ambiguous | 0.325 | benign | -0.682 | Destabilizing | 0.801 | D | 0.422 | neutral | N | 0.406606373 | None | None | N |
Y/E | 0.7784 | likely_pathogenic | 0.7047 | pathogenic | -0.551 | Destabilizing | 0.525 | D | 0.337 | neutral | None | None | None | None | N |
Y/F | 0.1677 | likely_benign | 0.16 | benign | -0.677 | Destabilizing | 0.012 | N | 0.16 | neutral | N | 0.417804801 | None | None | N |
Y/G | 0.6023 | likely_pathogenic | 0.5397 | ambiguous | -2.339 | Highly Destabilizing | 0.915 | D | 0.389 | neutral | None | None | None | None | N |
Y/H | 0.2878 | likely_benign | 0.2357 | benign | -0.819 | Destabilizing | 0.966 | D | 0.404 | neutral | N | 0.410012037 | None | None | N |
Y/I | 0.6161 | likely_pathogenic | 0.5697 | pathogenic | -0.933 | Destabilizing | 0.728 | D | 0.408 | neutral | None | None | None | None | N |
Y/K | 0.6707 | likely_pathogenic | 0.6094 | pathogenic | -1.065 | Destabilizing | 0.067 | N | 0.279 | neutral | None | None | None | None | N |
Y/L | 0.5754 | likely_pathogenic | 0.5429 | ambiguous | -0.933 | Destabilizing | 0.525 | D | 0.306 | neutral | None | None | None | None | N |
Y/M | 0.7491 | likely_pathogenic | 0.7332 | pathogenic | -0.745 | Destabilizing | 0.974 | D | 0.385 | neutral | None | None | None | None | N |
Y/N | 0.2556 | likely_benign | 0.194 | benign | -1.542 | Destabilizing | 0.891 | D | 0.396 | neutral | N | 0.41945824 | None | None | N |
Y/P | 0.8779 | likely_pathogenic | 0.857 | pathogenic | -1.283 | Destabilizing | 0.991 | D | 0.428 | neutral | None | None | None | None | N |
Y/Q | 0.6319 | likely_pathogenic | 0.5575 | ambiguous | -1.343 | Destabilizing | 0.08 | N | 0.197 | neutral | None | None | None | None | N |
Y/R | 0.5232 | ambiguous | 0.4466 | ambiguous | -0.839 | Destabilizing | 0.728 | D | 0.383 | neutral | None | None | None | None | N |
Y/S | 0.3378 | likely_benign | 0.2813 | benign | -2.104 | Highly Destabilizing | 0.801 | D | 0.347 | neutral | N | 0.42105575 | None | None | N |
Y/T | 0.5981 | likely_pathogenic | 0.5373 | ambiguous | -1.865 | Destabilizing | 0.915 | D | 0.387 | neutral | None | None | None | None | N |
Y/V | 0.5207 | ambiguous | 0.4822 | ambiguous | -1.283 | Destabilizing | 0.842 | D | 0.335 | neutral | None | None | None | None | N |
Y/W | 0.6195 | likely_pathogenic | 0.5962 | pathogenic | -0.247 | Destabilizing | 0.991 | D | 0.385 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.