Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6433 | 19522;19523;19524 | chr2:178728629;178728628;178728627 | chr2:179593356;179593355;179593354 |
N2AB | 6116 | 18571;18572;18573 | chr2:178728629;178728628;178728627 | chr2:179593356;179593355;179593354 |
N2A | 5189 | 15790;15791;15792 | chr2:178728629;178728628;178728627 | chr2:179593356;179593355;179593354 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/T | None | None | 0.784 | N | 0.517 | 0.493 | 0.810469866474 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.5798 | likely_pathogenic | 0.4932 | ambiguous | -2.071 | Highly Destabilizing | 0.495 | N | 0.392 | neutral | None | None | None | None | N |
M/C | 0.8605 | likely_pathogenic | 0.8121 | pathogenic | -1.495 | Destabilizing | 0.981 | D | 0.603 | neutral | None | None | None | None | N |
M/D | 0.9607 | likely_pathogenic | 0.9267 | pathogenic | -0.486 | Destabilizing | 0.981 | D | 0.659 | neutral | None | None | None | None | N |
M/E | 0.7824 | likely_pathogenic | 0.6774 | pathogenic | -0.38 | Destabilizing | 0.936 | D | 0.623 | neutral | None | None | None | None | N |
M/F | 0.4365 | ambiguous | 0.3768 | ambiguous | -0.845 | Destabilizing | 0.704 | D | 0.457 | neutral | None | None | None | None | N |
M/G | 0.8575 | likely_pathogenic | 0.7856 | pathogenic | -2.471 | Highly Destabilizing | 0.936 | D | 0.625 | neutral | None | None | None | None | N |
M/H | 0.7884 | likely_pathogenic | 0.7096 | pathogenic | -1.574 | Destabilizing | 0.995 | D | 0.593 | neutral | None | None | None | None | N |
M/I | 0.4032 | ambiguous | 0.3325 | benign | -0.983 | Destabilizing | 0.139 | N | 0.328 | neutral | N | 0.363320608 | None | None | N |
M/K | 0.5137 | ambiguous | 0.3804 | ambiguous | -0.661 | Destabilizing | 0.784 | D | 0.533 | neutral | D | 0.523362625 | None | None | N |
M/L | 0.1573 | likely_benign | 0.1256 | benign | -0.983 | Destabilizing | 0.001 | N | 0.115 | neutral | N | 0.414634863 | None | None | N |
M/N | 0.8027 | likely_pathogenic | 0.7367 | pathogenic | -0.652 | Destabilizing | 0.981 | D | 0.649 | neutral | None | None | None | None | N |
M/P | 0.9442 | likely_pathogenic | 0.9189 | pathogenic | -1.321 | Destabilizing | 0.981 | D | 0.651 | neutral | None | None | None | None | N |
M/Q | 0.5137 | ambiguous | 0.4353 | ambiguous | -0.571 | Destabilizing | 0.981 | D | 0.569 | neutral | None | None | None | None | N |
M/R | 0.5221 | ambiguous | 0.3925 | ambiguous | -0.428 | Destabilizing | 0.784 | D | 0.643 | neutral | N | 0.51976496 | None | None | N |
M/S | 0.6178 | likely_pathogenic | 0.5441 | ambiguous | -1.383 | Destabilizing | 0.828 | D | 0.504 | neutral | None | None | None | None | N |
M/T | 0.3014 | likely_benign | 0.2407 | benign | -1.14 | Destabilizing | 0.784 | D | 0.517 | neutral | N | 0.498696254 | None | None | N |
M/V | 0.0942 | likely_benign | 0.0862 | benign | -1.321 | Destabilizing | 0.139 | N | 0.291 | neutral | N | 0.465655542 | None | None | N |
M/W | 0.8234 | likely_pathogenic | 0.7481 | pathogenic | -0.814 | Destabilizing | 0.995 | D | 0.589 | neutral | None | None | None | None | N |
M/Y | 0.7613 | likely_pathogenic | 0.6817 | pathogenic | -0.857 | Destabilizing | 0.981 | D | 0.645 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.