Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6436 | 19531;19532;19533 | chr2:178728620;178728619;178728618 | chr2:179593347;179593346;179593345 |
N2AB | 6119 | 18580;18581;18582 | chr2:178728620;178728619;178728618 | chr2:179593347;179593346;179593345 |
N2A | 5192 | 15799;15800;15801 | chr2:178728620;178728619;178728618 | chr2:179593347;179593346;179593345 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs778366508 | -0.2 | 0.896 | D | 0.434 | 0.283 | 0.413891365518 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.61E-05 | None | 0 | None | 0 | 0 | 0 |
E/A | rs778366508 | -0.2 | 0.896 | D | 0.434 | 0.283 | 0.413891365518 | gnomAD-4.0.0 | 1.59258E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78056E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2385 | likely_benign | 0.2074 | benign | -0.502 | Destabilizing | 0.896 | D | 0.434 | neutral | D | 0.533944979 | None | None | N |
E/C | 0.9043 | likely_pathogenic | 0.8709 | pathogenic | -0.19 | Destabilizing | 0.999 | D | 0.537 | neutral | None | None | None | None | N |
E/D | 0.162 | likely_benign | 0.1337 | benign | -0.285 | Destabilizing | 0.026 | N | 0.21 | neutral | N | 0.485132311 | None | None | N |
E/F | 0.8096 | likely_pathogenic | 0.7764 | pathogenic | -0.223 | Destabilizing | 0.988 | D | 0.52 | neutral | None | None | None | None | N |
E/G | 0.2706 | likely_benign | 0.2016 | benign | -0.699 | Destabilizing | 0.896 | D | 0.464 | neutral | N | 0.501411273 | None | None | N |
E/H | 0.4685 | ambiguous | 0.4254 | ambiguous | 0.104 | Stabilizing | 0.999 | D | 0.356 | neutral | None | None | None | None | N |
E/I | 0.3916 | ambiguous | 0.3706 | ambiguous | -0.014 | Destabilizing | 0.261 | N | 0.383 | neutral | None | None | None | None | N |
E/K | 0.1615 | likely_benign | 0.1277 | benign | 0.356 | Stabilizing | 0.896 | D | 0.425 | neutral | N | 0.460735299 | None | None | N |
E/L | 0.4464 | ambiguous | 0.4379 | ambiguous | -0.014 | Destabilizing | 0.851 | D | 0.469 | neutral | None | None | None | None | N |
E/M | 0.5483 | ambiguous | 0.5171 | ambiguous | 0.036 | Stabilizing | 0.997 | D | 0.506 | neutral | None | None | None | None | N |
E/N | 0.3412 | ambiguous | 0.286 | benign | -0.152 | Destabilizing | 0.952 | D | 0.358 | neutral | None | None | None | None | N |
E/P | 0.9095 | likely_pathogenic | 0.8732 | pathogenic | -0.158 | Destabilizing | 0.988 | D | 0.434 | neutral | None | None | None | None | N |
E/Q | 0.133 | likely_benign | 0.1254 | benign | -0.082 | Destabilizing | 0.984 | D | 0.375 | neutral | N | 0.507547811 | None | None | N |
E/R | 0.2507 | likely_benign | 0.2113 | benign | 0.591 | Stabilizing | 0.988 | D | 0.366 | neutral | None | None | None | None | N |
E/S | 0.2729 | likely_benign | 0.2368 | benign | -0.274 | Destabilizing | 0.851 | D | 0.384 | neutral | None | None | None | None | N |
E/T | 0.2945 | likely_benign | 0.2505 | benign | -0.096 | Destabilizing | 0.132 | N | 0.223 | neutral | None | None | None | None | N |
E/V | 0.2592 | likely_benign | 0.2343 | benign | -0.158 | Destabilizing | 0.811 | D | 0.465 | neutral | N | 0.492637074 | None | None | N |
E/W | 0.9023 | likely_pathogenic | 0.8754 | pathogenic | -0.002 | Destabilizing | 0.999 | D | 0.617 | neutral | None | None | None | None | N |
E/Y | 0.6866 | likely_pathogenic | 0.629 | pathogenic | 0.033 | Stabilizing | 0.996 | D | 0.509 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.