Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6437 | 19534;19535;19536 | chr2:178728617;178728616;178728615 | chr2:179593344;179593343;179593342 |
N2AB | 6120 | 18583;18584;18585 | chr2:178728617;178728616;178728615 | chr2:179593344;179593343;179593342 |
N2A | 5193 | 15802;15803;15804 | chr2:178728617;178728616;178728615 | chr2:179593344;179593343;179593342 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/Y | None | None | 0.999 | N | 0.567 | 0.352 | 0.416328079214 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.592 | likely_pathogenic | 0.424 | ambiguous | -0.056 | Destabilizing | 0.983 | D | 0.455 | neutral | None | None | None | None | N |
N/C | 0.7477 | likely_pathogenic | 0.5954 | pathogenic | 0.108 | Stabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
N/D | 0.1359 | likely_benign | 0.1008 | benign | 0.087 | Stabilizing | 0.117 | N | 0.241 | neutral | N | 0.450530508 | None | None | N |
N/E | 0.5107 | ambiguous | 0.3464 | ambiguous | 0.026 | Stabilizing | 0.966 | D | 0.406 | neutral | None | None | None | None | N |
N/F | 0.8835 | likely_pathogenic | 0.809 | pathogenic | -0.657 | Destabilizing | 1.0 | D | 0.604 | neutral | None | None | None | None | N |
N/G | 0.3894 | ambiguous | 0.2916 | benign | -0.15 | Destabilizing | 0.983 | D | 0.374 | neutral | None | None | None | None | N |
N/H | 0.1917 | likely_benign | 0.1541 | benign | -0.16 | Destabilizing | 0.999 | D | 0.547 | neutral | N | 0.472733186 | None | None | N |
N/I | 0.8101 | likely_pathogenic | 0.6456 | pathogenic | 0.091 | Stabilizing | 0.997 | D | 0.618 | neutral | N | 0.497927785 | None | None | N |
N/K | 0.408 | ambiguous | 0.2867 | benign | 0.089 | Stabilizing | 0.977 | D | 0.459 | neutral | N | 0.455083003 | None | None | N |
N/L | 0.7221 | likely_pathogenic | 0.5742 | pathogenic | 0.091 | Stabilizing | 0.998 | D | 0.595 | neutral | None | None | None | None | N |
N/M | 0.7034 | likely_pathogenic | 0.5677 | pathogenic | 0.088 | Stabilizing | 1.0 | D | 0.582 | neutral | None | None | None | None | N |
N/P | 0.9538 | likely_pathogenic | 0.875 | pathogenic | 0.065 | Stabilizing | 0.998 | D | 0.543 | neutral | None | None | None | None | N |
N/Q | 0.4764 | ambiguous | 0.3647 | ambiguous | -0.304 | Destabilizing | 0.998 | D | 0.525 | neutral | None | None | None | None | N |
N/R | 0.5056 | ambiguous | 0.3746 | ambiguous | 0.153 | Stabilizing | 0.998 | D | 0.526 | neutral | None | None | None | None | N |
N/S | 0.1945 | likely_benign | 0.1372 | benign | -0.074 | Destabilizing | 0.977 | D | 0.383 | neutral | N | 0.455955149 | None | None | N |
N/T | 0.4653 | ambiguous | 0.2969 | benign | -0.022 | Destabilizing | 0.989 | D | 0.441 | neutral | N | 0.461692822 | None | None | N |
N/V | 0.804 | likely_pathogenic | 0.634 | pathogenic | 0.065 | Stabilizing | 0.998 | D | 0.593 | neutral | None | None | None | None | N |
N/W | 0.9108 | likely_pathogenic | 0.8503 | pathogenic | -0.804 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | N |
N/Y | 0.3442 | ambiguous | 0.2647 | benign | -0.472 | Destabilizing | 0.999 | D | 0.567 | neutral | N | 0.477354768 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.