Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6440 | 19543;19544;19545 | chr2:178728608;178728607;178728606 | chr2:179593335;179593334;179593333 |
N2AB | 6123 | 18592;18593;18594 | chr2:178728608;178728607;178728606 | chr2:179593335;179593334;179593333 |
N2A | 5196 | 15811;15812;15813 | chr2:178728608;178728607;178728606 | chr2:179593335;179593334;179593333 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs1484285596 | None | 0.885 | N | 0.632 | 0.128 | 0.181679512989 | gnomAD-4.0.0 | 2.73792E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.5986E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.814 | likely_pathogenic | 0.7509 | pathogenic | -0.633 | Destabilizing | 0.999 | D | 0.751 | deleterious | None | None | None | None | N |
A/D | 0.9922 | likely_pathogenic | 0.9815 | pathogenic | -2.115 | Highly Destabilizing | 0.982 | D | 0.75 | deleterious | N | 0.478849252 | None | None | N |
A/E | 0.9841 | likely_pathogenic | 0.9673 | pathogenic | -1.814 | Destabilizing | 0.953 | D | 0.727 | prob.delet. | None | None | None | None | N |
A/F | 0.9023 | likely_pathogenic | 0.8196 | pathogenic | -0.235 | Destabilizing | 0.998 | D | 0.77 | deleterious | None | None | None | None | N |
A/G | 0.4479 | ambiguous | 0.3637 | ambiguous | -1.188 | Destabilizing | 0.76 | D | 0.651 | neutral | N | 0.496767017 | None | None | N |
A/H | 0.9836 | likely_pathogenic | 0.9725 | pathogenic | -1.992 | Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | N |
A/I | 0.7971 | likely_pathogenic | 0.6685 | pathogenic | 0.988 | Stabilizing | 0.993 | D | 0.754 | deleterious | None | None | None | None | N |
A/K | 0.9949 | likely_pathogenic | 0.9897 | pathogenic | -0.471 | Destabilizing | 0.953 | D | 0.726 | prob.delet. | None | None | None | None | N |
A/L | 0.7153 | likely_pathogenic | 0.6145 | pathogenic | 0.988 | Stabilizing | 0.953 | D | 0.715 | prob.delet. | None | None | None | None | N |
A/M | 0.8214 | likely_pathogenic | 0.7209 | pathogenic | 0.439 | Stabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | N |
A/N | 0.975 | likely_pathogenic | 0.9561 | pathogenic | -1.082 | Destabilizing | 0.986 | D | 0.752 | deleterious | None | None | None | None | N |
A/P | 0.9871 | likely_pathogenic | 0.978 | pathogenic | 0.497 | Stabilizing | 0.991 | D | 0.747 | deleterious | N | 0.485343712 | None | None | N |
A/Q | 0.9718 | likely_pathogenic | 0.9559 | pathogenic | -0.655 | Destabilizing | 0.993 | D | 0.769 | deleterious | None | None | None | None | N |
A/R | 0.984 | likely_pathogenic | 0.9731 | pathogenic | -1.062 | Destabilizing | 0.986 | D | 0.765 | deleterious | None | None | None | None | N |
A/S | 0.3286 | likely_benign | 0.2641 | benign | -1.428 | Destabilizing | 0.079 | N | 0.463 | neutral | N | 0.410012037 | None | None | N |
A/T | 0.5332 | ambiguous | 0.3591 | ambiguous | -0.97 | Destabilizing | 0.885 | D | 0.632 | neutral | N | 0.493302638 | None | None | N |
A/V | 0.5179 | ambiguous | 0.3536 | ambiguous | 0.497 | Stabilizing | 0.939 | D | 0.651 | neutral | N | 0.453601746 | None | None | N |
A/W | 0.9926 | likely_pathogenic | 0.9864 | pathogenic | -1.167 | Destabilizing | 0.999 | D | 0.775 | deleterious | None | None | None | None | N |
A/Y | 0.9654 | likely_pathogenic | 0.9359 | pathogenic | -0.505 | Destabilizing | 0.998 | D | 0.769 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.