Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6448 | 19567;19568;19569 | chr2:178728584;178728583;178728582 | chr2:179593311;179593310;179593309 |
N2AB | 6131 | 18616;18617;18618 | chr2:178728584;178728583;178728582 | chr2:179593311;179593310;179593309 |
N2A | 5204 | 15835;15836;15837 | chr2:178728584;178728583;178728582 | chr2:179593311;179593310;179593309 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | None | None | 0.468 | N | 0.173 | 0.114 | 0.429203605099 | gnomAD-4.0.0 | 1.59276E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43365E-05 | 0 |
M/V | rs1305903315 | None | 0.159 | N | 0.177 | 0.084 | 0.408172294925 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
M/V | rs1305903315 | None | 0.159 | N | 0.177 | 0.084 | 0.408172294925 | gnomAD-4.0.0 | 6.81902E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.3255E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.2304 | likely_benign | 0.2531 | benign | -1.474 | Destabilizing | 0.051 | N | 0.193 | neutral | None | None | None | None | N |
M/C | 0.689 | likely_pathogenic | 0.734 | pathogenic | -1.149 | Destabilizing | 0.968 | D | 0.341 | neutral | None | None | None | None | N |
M/D | 0.501 | ambiguous | 0.5602 | ambiguous | -0.219 | Destabilizing | 0.001 | N | 0.137 | neutral | None | None | None | None | N |
M/E | 0.213 | likely_benign | 0.2465 | benign | -0.171 | Destabilizing | 0.003 | N | 0.099 | neutral | None | None | None | None | N |
M/F | 0.3161 | likely_benign | 0.3375 | benign | -0.451 | Destabilizing | 0.896 | D | 0.201 | neutral | None | None | None | None | N |
M/G | 0.3012 | likely_benign | 0.3816 | ambiguous | -1.791 | Destabilizing | 0.111 | N | 0.261 | neutral | None | None | None | None | N |
M/H | 0.3535 | ambiguous | 0.3907 | ambiguous | -0.721 | Destabilizing | 0.908 | D | 0.467 | neutral | None | None | None | None | N |
M/I | 0.3561 | ambiguous | 0.3311 | benign | -0.66 | Destabilizing | 0.468 | N | 0.173 | neutral | N | 0.451595741 | None | None | N |
M/K | 0.1028 | likely_benign | 0.1164 | benign | -0.399 | Destabilizing | 0.086 | N | 0.231 | neutral | N | 0.391083213 | None | None | N |
M/L | 0.1074 | likely_benign | 0.1054 | benign | -0.66 | Destabilizing | 0.076 | N | 0.189 | neutral | N | 0.425563933 | None | None | N |
M/N | 0.2367 | likely_benign | 0.2722 | benign | -0.38 | Destabilizing | 0.2 | N | 0.326 | neutral | None | None | None | None | N |
M/P | 0.8062 | likely_pathogenic | 0.831 | pathogenic | -0.905 | Destabilizing | 0.538 | D | 0.341 | neutral | None | None | None | None | N |
M/Q | 0.1065 | likely_benign | 0.1319 | benign | -0.401 | Destabilizing | 0.008 | N | 0.091 | neutral | None | None | None | None | N |
M/R | 0.1122 | likely_benign | 0.1252 | benign | 0.069 | Stabilizing | 0.302 | N | 0.348 | neutral | N | 0.392643438 | None | None | N |
M/S | 0.1712 | likely_benign | 0.2028 | benign | -0.999 | Destabilizing | 0.003 | N | 0.101 | neutral | None | None | None | None | N |
M/T | 0.1182 | likely_benign | 0.1206 | benign | -0.83 | Destabilizing | 0.086 | N | 0.232 | neutral | N | 0.342291975 | None | None | N |
M/V | 0.1091 | likely_benign | 0.1032 | benign | -0.905 | Destabilizing | 0.159 | N | 0.177 | neutral | N | 0.393510229 | None | None | N |
M/W | 0.5156 | ambiguous | 0.5516 | ambiguous | -0.409 | Destabilizing | 0.968 | D | 0.341 | neutral | None | None | None | None | N |
M/Y | 0.5076 | ambiguous | 0.5426 | ambiguous | -0.411 | Destabilizing | 0.896 | D | 0.358 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.