Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6449 | 19570;19571;19572 | chr2:178728581;178728580;178728579 | chr2:179593308;179593307;179593306 |
N2AB | 6132 | 18619;18620;18621 | chr2:178728581;178728580;178728579 | chr2:179593308;179593307;179593306 |
N2A | 5205 | 15838;15839;15840 | chr2:178728581;178728580;178728579 | chr2:179593308;179593307;179593306 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1282291767 | 0.186 | 0.026 | N | 0.266 | 0.052 | 0.0401082797425 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
K/R | rs1282291767 | 0.186 | 0.026 | N | 0.266 | 0.052 | 0.0401082797425 | gnomAD-4.0.0 | 1.59264E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86008E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3569 | ambiguous | 0.2794 | benign | 0.002 | Stabilizing | 0.919 | D | 0.451 | neutral | None | None | None | None | N |
K/C | 0.8391 | likely_pathogenic | 0.7844 | pathogenic | -0.194 | Destabilizing | 0.999 | D | 0.559 | neutral | None | None | None | None | N |
K/D | 0.6354 | likely_pathogenic | 0.5323 | ambiguous | 0.094 | Stabilizing | 0.976 | D | 0.395 | neutral | None | None | None | None | N |
K/E | 0.205 | likely_benign | 0.1723 | benign | 0.119 | Stabilizing | 0.811 | D | 0.423 | neutral | N | 0.500401968 | None | None | N |
K/F | 0.7481 | likely_pathogenic | 0.6558 | pathogenic | -0.073 | Destabilizing | 0.976 | D | 0.522 | neutral | None | None | None | None | N |
K/G | 0.4932 | ambiguous | 0.4116 | ambiguous | -0.234 | Destabilizing | 0.919 | D | 0.453 | neutral | None | None | None | None | N |
K/H | 0.4083 | ambiguous | 0.3379 | benign | -0.487 | Destabilizing | 0.997 | D | 0.427 | neutral | None | None | None | None | N |
K/I | 0.349 | ambiguous | 0.2898 | benign | 0.554 | Stabilizing | 0.952 | D | 0.532 | neutral | None | None | None | None | N |
K/L | 0.2998 | likely_benign | 0.2263 | benign | 0.554 | Stabilizing | 0.034 | N | 0.333 | neutral | None | None | None | None | N |
K/M | 0.2253 | likely_benign | 0.1666 | benign | 0.269 | Stabilizing | 0.968 | D | 0.421 | neutral | N | 0.46346252 | None | None | N |
K/N | 0.4476 | ambiguous | 0.34 | ambiguous | 0.199 | Stabilizing | 0.968 | D | 0.361 | neutral | N | 0.458503271 | None | None | N |
K/P | 0.4322 | ambiguous | 0.359 | ambiguous | 0.399 | Stabilizing | 0.988 | D | 0.413 | neutral | None | None | None | None | N |
K/Q | 0.1592 | likely_benign | 0.1336 | benign | 0.049 | Stabilizing | 0.211 | N | 0.265 | neutral | N | 0.45445112 | None | None | N |
K/R | 0.0978 | likely_benign | 0.0908 | benign | -0.087 | Destabilizing | 0.026 | N | 0.266 | neutral | N | 0.459131349 | None | None | N |
K/S | 0.4435 | ambiguous | 0.3323 | benign | -0.304 | Destabilizing | 0.919 | D | 0.399 | neutral | None | None | None | None | N |
K/T | 0.2224 | likely_benign | 0.1666 | benign | -0.12 | Destabilizing | 0.896 | D | 0.435 | neutral | N | 0.50630922 | None | None | N |
K/V | 0.3588 | ambiguous | 0.2897 | benign | 0.399 | Stabilizing | 0.851 | D | 0.439 | neutral | None | None | None | None | N |
K/W | 0.7855 | likely_pathogenic | 0.7305 | pathogenic | -0.071 | Destabilizing | 0.999 | D | 0.607 | neutral | None | None | None | None | N |
K/Y | 0.636 | likely_pathogenic | 0.5464 | ambiguous | 0.266 | Stabilizing | 0.996 | D | 0.493 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.