Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6450 | 19573;19574;19575 | chr2:178728578;178728577;178728576 | chr2:179593305;179593304;179593303 |
N2AB | 6133 | 18622;18623;18624 | chr2:178728578;178728577;178728576 | chr2:179593305;179593304;179593303 |
N2A | 5206 | 15841;15842;15843 | chr2:178728578;178728577;178728576 | chr2:179593305;179593304;179593303 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/E | None | None | 0.001 | N | 0.077 | 0.102 | 0.0551355673512 | gnomAD-4.0.0 | 2.73794E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52551E-05 | None | 0 | 0 | 2.69902E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1502 | likely_benign | 0.1466 | benign | -0.157 | Destabilizing | 0.3 | N | 0.157 | neutral | None | None | None | None | N |
Q/C | 0.7749 | likely_pathogenic | 0.7452 | pathogenic | 0.172 | Stabilizing | 0.995 | D | 0.246 | neutral | None | None | None | None | N |
Q/D | 0.2037 | likely_benign | 0.1773 | benign | -0.014 | Destabilizing | 0.003 | N | 0.121 | neutral | None | None | None | None | N |
Q/E | 0.0556 | likely_benign | 0.052 | benign | -0.045 | Destabilizing | 0.001 | N | 0.077 | neutral | N | 0.342514822 | None | None | N |
Q/F | 0.698 | likely_pathogenic | 0.6739 | pathogenic | -0.418 | Destabilizing | 0.007 | N | 0.177 | neutral | None | None | None | None | N |
Q/G | 0.1744 | likely_benign | 0.1641 | benign | -0.33 | Destabilizing | 0.495 | N | 0.211 | neutral | None | None | None | None | N |
Q/H | 0.2263 | likely_benign | 0.205 | benign | -0.148 | Destabilizing | 0.927 | D | 0.198 | neutral | N | 0.449205144 | None | None | N |
Q/I | 0.4028 | ambiguous | 0.3784 | ambiguous | 0.207 | Stabilizing | 0.704 | D | 0.351 | neutral | None | None | None | None | N |
Q/K | 0.0947 | likely_benign | 0.0856 | benign | 0.085 | Stabilizing | 0.139 | N | 0.136 | neutral | N | 0.436043845 | None | None | N |
Q/L | 0.1389 | likely_benign | 0.1332 | benign | 0.207 | Stabilizing | 0.27 | N | 0.211 | neutral | N | 0.480450771 | None | None | N |
Q/M | 0.3343 | likely_benign | 0.3295 | benign | 0.34 | Stabilizing | 0.981 | D | 0.217 | neutral | None | None | None | None | N |
Q/N | 0.1889 | likely_benign | 0.1808 | benign | -0.175 | Destabilizing | 0.495 | N | 0.121 | neutral | None | None | None | None | N |
Q/P | 0.1229 | likely_benign | 0.1137 | benign | 0.113 | Stabilizing | 0.784 | D | 0.297 | neutral | N | 0.467790904 | None | None | N |
Q/R | 0.1183 | likely_benign | 0.1104 | benign | 0.28 | Stabilizing | 0.425 | N | 0.129 | neutral | N | 0.423730696 | None | None | N |
Q/S | 0.1729 | likely_benign | 0.1723 | benign | -0.178 | Destabilizing | 0.176 | N | 0.125 | neutral | None | None | None | None | N |
Q/T | 0.1693 | likely_benign | 0.1612 | benign | -0.061 | Destabilizing | 0.013 | N | 0.103 | neutral | None | None | None | None | N |
Q/V | 0.2472 | likely_benign | 0.2409 | benign | 0.113 | Stabilizing | 0.495 | N | 0.233 | neutral | None | None | None | None | N |
Q/W | 0.5219 | ambiguous | 0.48 | ambiguous | -0.439 | Destabilizing | 0.995 | D | 0.24 | neutral | None | None | None | None | N |
Q/Y | 0.4656 | ambiguous | 0.4426 | ambiguous | -0.165 | Destabilizing | 0.543 | D | 0.281 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.