Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6454 | 19585;19586;19587 | chr2:178728566;178728565;178728564 | chr2:179593293;179593292;179593291 |
N2AB | 6137 | 18634;18635;18636 | chr2:178728566;178728565;178728564 | chr2:179593293;179593292;179593291 |
N2A | 5210 | 15853;15854;15855 | chr2:178728566;178728565;178728564 | chr2:179593293;179593292;179593291 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/L | None | None | 0.012 | N | 0.363 | 0.219 | 0.275215494804 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1735 | likely_benign | 0.1667 | benign | -0.945 | Destabilizing | None | N | 0.177 | neutral | None | None | None | None | N |
Q/C | 0.5641 | likely_pathogenic | 0.5449 | ambiguous | -0.163 | Destabilizing | 0.356 | N | 0.501 | neutral | None | None | None | None | N |
Q/D | 0.3493 | ambiguous | 0.3062 | benign | -0.688 | Destabilizing | 0.007 | N | 0.247 | neutral | None | None | None | None | N |
Q/E | 0.0727 | likely_benign | 0.0647 | benign | -0.553 | Destabilizing | None | N | 0.113 | neutral | N | 0.378175418 | None | None | N |
Q/F | 0.5472 | ambiguous | 0.518 | ambiguous | -0.6 | Destabilizing | 0.356 | N | 0.558 | neutral | None | None | None | None | N |
Q/G | 0.3021 | likely_benign | 0.2596 | benign | -1.326 | Destabilizing | 0.016 | N | 0.344 | neutral | None | None | None | None | N |
Q/H | 0.1917 | likely_benign | 0.1753 | benign | -1.097 | Destabilizing | 0.295 | N | 0.404 | neutral | N | 0.493655794 | None | None | N |
Q/I | 0.2322 | likely_benign | 0.2193 | benign | 0.049 | Stabilizing | 0.072 | N | 0.503 | neutral | None | None | None | None | N |
Q/K | 0.0785 | likely_benign | 0.0687 | benign | -0.354 | Destabilizing | 0.005 | N | 0.264 | neutral | N | 0.455692052 | None | None | N |
Q/L | 0.104 | likely_benign | 0.0974 | benign | 0.049 | Stabilizing | 0.012 | N | 0.363 | neutral | N | 0.422467699 | None | None | N |
Q/M | 0.2621 | likely_benign | 0.2568 | benign | 0.574 | Stabilizing | 0.628 | D | 0.411 | neutral | None | None | None | None | N |
Q/N | 0.2176 | likely_benign | 0.201 | benign | -0.959 | Destabilizing | 0.031 | N | 0.339 | neutral | None | None | None | None | N |
Q/P | 0.1284 | likely_benign | 0.1208 | benign | -0.252 | Destabilizing | 0.106 | N | 0.429 | neutral | N | 0.508507816 | None | None | N |
Q/R | 0.0927 | likely_benign | 0.0864 | benign | -0.341 | Destabilizing | 0.012 | N | 0.361 | neutral | N | 0.459484505 | None | None | N |
Q/S | 0.2061 | likely_benign | 0.202 | benign | -1.149 | Destabilizing | 0.007 | N | 0.241 | neutral | None | None | None | None | N |
Q/T | 0.1562 | likely_benign | 0.1482 | benign | -0.806 | Destabilizing | None | N | 0.185 | neutral | None | None | None | None | N |
Q/V | 0.164 | likely_benign | 0.1601 | benign | -0.252 | Destabilizing | 0.016 | N | 0.367 | neutral | None | None | None | None | N |
Q/W | 0.4338 | ambiguous | 0.3899 | ambiguous | -0.428 | Destabilizing | 0.864 | D | 0.509 | neutral | None | None | None | None | N |
Q/Y | 0.3729 | ambiguous | 0.3396 | benign | -0.204 | Destabilizing | 0.628 | D | 0.513 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.