Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6457 | 19594;19595;19596 | chr2:178728557;178728556;178728555 | chr2:179593284;179593283;179593282 |
N2AB | 6140 | 18643;18644;18645 | chr2:178728557;178728556;178728555 | chr2:179593284;179593283;179593282 |
N2A | 5213 | 15862;15863;15864 | chr2:178728557;178728556;178728555 | chr2:179593284;179593283;179593282 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/I | None | None | 0.961 | N | 0.735 | 0.213 | 0.382761230579 | gnomAD-4.0.0 | 1.59309E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8608E-06 | 0 | 0 |
F/L | rs2079784971 | None | 0.135 | N | 0.437 | 0.113 | 0.260735089382 | gnomAD-4.0.0 | 1.59322E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86103E-06 | 0 | 0 |
F/S | rs2079785463 | None | 0.997 | N | 0.815 | 0.546 | 0.42748209135 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.966 | likely_pathogenic | 0.9496 | pathogenic | -2.799 | Highly Destabilizing | 0.985 | D | 0.794 | deleterious | None | None | None | None | N |
F/C | 0.6353 | likely_pathogenic | 0.4727 | ambiguous | -1.529 | Destabilizing | 0.265 | N | 0.709 | prob.delet. | N | 0.35078951 | None | None | N |
F/D | 0.9997 | likely_pathogenic | 0.9994 | pathogenic | -3.243 | Highly Destabilizing | 0.999 | D | 0.864 | deleterious | None | None | None | None | N |
F/E | 0.9991 | likely_pathogenic | 0.9987 | pathogenic | -3.035 | Highly Destabilizing | 0.999 | D | 0.863 | deleterious | None | None | None | None | N |
F/G | 0.9919 | likely_pathogenic | 0.9872 | pathogenic | -3.234 | Highly Destabilizing | 0.998 | D | 0.845 | deleterious | None | None | None | None | N |
F/H | 0.9955 | likely_pathogenic | 0.9923 | pathogenic | -1.835 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
F/I | 0.6851 | likely_pathogenic | 0.5518 | ambiguous | -1.372 | Destabilizing | 0.961 | D | 0.735 | prob.delet. | N | 0.477831753 | None | None | N |
F/K | 0.9992 | likely_pathogenic | 0.9988 | pathogenic | -1.892 | Destabilizing | 0.999 | D | 0.862 | deleterious | None | None | None | None | N |
F/L | 0.9514 | likely_pathogenic | 0.9293 | pathogenic | -1.372 | Destabilizing | 0.135 | N | 0.437 | neutral | N | 0.454858893 | None | None | N |
F/M | 0.7971 | likely_pathogenic | 0.7347 | pathogenic | -1.021 | Destabilizing | 0.996 | D | 0.715 | prob.delet. | None | None | None | None | N |
F/N | 0.9977 | likely_pathogenic | 0.9959 | pathogenic | -2.399 | Highly Destabilizing | 0.999 | D | 0.863 | deleterious | None | None | None | None | N |
F/P | 0.9998 | likely_pathogenic | 0.9996 | pathogenic | -1.86 | Destabilizing | 0.999 | D | 0.874 | deleterious | None | None | None | None | N |
F/Q | 0.9976 | likely_pathogenic | 0.9965 | pathogenic | -2.347 | Highly Destabilizing | 0.999 | D | 0.881 | deleterious | None | None | None | None | N |
F/R | 0.9963 | likely_pathogenic | 0.9948 | pathogenic | -1.461 | Destabilizing | 0.999 | D | 0.863 | deleterious | None | None | None | None | N |
F/S | 0.9895 | likely_pathogenic | 0.9788 | pathogenic | -2.983 | Highly Destabilizing | 0.997 | D | 0.815 | deleterious | N | 0.480695676 | None | None | N |
F/T | 0.9898 | likely_pathogenic | 0.9823 | pathogenic | -2.666 | Highly Destabilizing | 0.998 | D | 0.815 | deleterious | None | None | None | None | N |
F/V | 0.5522 | ambiguous | 0.4206 | ambiguous | -1.86 | Destabilizing | 0.961 | D | 0.771 | deleterious | N | 0.471751143 | None | None | N |
F/W | 0.9667 | likely_pathogenic | 0.9499 | pathogenic | -0.424 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
F/Y | 0.7303 | likely_pathogenic | 0.6491 | pathogenic | -0.804 | Destabilizing | 0.997 | D | 0.663 | neutral | N | 0.480695676 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.