Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6460 | 19603;19604;19605 | chr2:178728548;178728547;178728546 | chr2:179593275;179593274;179593273 |
N2AB | 6143 | 18652;18653;18654 | chr2:178728548;178728547;178728546 | chr2:179593275;179593274;179593273 |
N2A | 5216 | 15871;15872;15873 | chr2:178728548;178728547;178728546 | chr2:179593275;179593274;179593273 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs766551817 | -1.543 | 0.165 | N | 0.574 | 0.185 | 0.353548585375 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
E/G | rs766551817 | -1.543 | 0.165 | N | 0.574 | 0.185 | 0.353548585375 | gnomAD-4.0.0 | 2.73873E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69962E-06 | 0 | 1.6581E-05 |
E/V | None | None | 0.324 | N | 0.576 | 0.215 | 0.348764635752 | gnomAD-4.0.0 | 6.84682E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99875E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2622 | likely_benign | 0.2674 | benign | -0.715 | Destabilizing | 0.003 | N | 0.163 | neutral | N | 0.481900005 | None | None | N |
E/C | 0.9268 | likely_pathogenic | 0.9365 | pathogenic | -0.247 | Destabilizing | 0.981 | D | 0.59 | neutral | None | None | None | None | N |
E/D | 0.2751 | likely_benign | 0.3238 | benign | -1.024 | Destabilizing | 0.001 | N | 0.113 | neutral | N | 0.513839065 | None | None | N |
E/F | 0.8881 | likely_pathogenic | 0.9031 | pathogenic | -0.702 | Destabilizing | 0.932 | D | 0.626 | neutral | None | None | None | None | N |
E/G | 0.3152 | likely_benign | 0.3134 | benign | -1.016 | Destabilizing | 0.165 | N | 0.574 | neutral | N | 0.508971963 | None | None | N |
E/H | 0.6742 | likely_pathogenic | 0.7004 | pathogenic | -1.028 | Destabilizing | 0.818 | D | 0.52 | neutral | None | None | None | None | N |
E/I | 0.609 | likely_pathogenic | 0.6205 | pathogenic | 0.083 | Stabilizing | 0.818 | D | 0.607 | neutral | None | None | None | None | N |
E/K | 0.3075 | likely_benign | 0.2706 | benign | -0.259 | Destabilizing | 0.09 | N | 0.375 | neutral | N | 0.443610976 | None | None | N |
E/L | 0.6949 | likely_pathogenic | 0.7098 | pathogenic | 0.083 | Stabilizing | 0.388 | N | 0.617 | neutral | None | None | None | None | N |
E/M | 0.6225 | likely_pathogenic | 0.6403 | pathogenic | 0.56 | Stabilizing | 0.932 | D | 0.567 | neutral | None | None | None | None | N |
E/N | 0.4837 | ambiguous | 0.5468 | ambiguous | -0.589 | Destabilizing | 0.241 | N | 0.385 | neutral | None | None | None | None | N |
E/P | 0.9949 | likely_pathogenic | 0.9943 | pathogenic | -0.161 | Destabilizing | 0.563 | D | 0.491 | neutral | None | None | None | None | N |
E/Q | 0.1676 | likely_benign | 0.1711 | benign | -0.526 | Destabilizing | 0.018 | N | 0.266 | neutral | N | 0.438437229 | None | None | N |
E/R | 0.4663 | ambiguous | 0.4315 | ambiguous | -0.235 | Destabilizing | 0.388 | N | 0.453 | neutral | None | None | None | None | N |
E/S | 0.2577 | likely_benign | 0.2792 | benign | -0.878 | Destabilizing | 0.01 | N | 0.1 | neutral | None | None | None | None | N |
E/T | 0.2943 | likely_benign | 0.2949 | benign | -0.622 | Destabilizing | 0.241 | N | 0.465 | neutral | None | None | None | None | N |
E/V | 0.391 | ambiguous | 0.388 | ambiguous | -0.161 | Destabilizing | 0.324 | N | 0.576 | neutral | N | 0.491308922 | None | None | N |
E/W | 0.952 | likely_pathogenic | 0.9564 | pathogenic | -0.6 | Destabilizing | 0.981 | D | 0.652 | neutral | None | None | None | None | N |
E/Y | 0.8391 | likely_pathogenic | 0.8584 | pathogenic | -0.458 | Destabilizing | 0.932 | D | 0.599 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.