Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6461 | 19606;19607;19608 | chr2:178728545;178728544;178728543 | chr2:179593272;179593271;179593270 |
N2AB | 6144 | 18655;18656;18657 | chr2:178728545;178728544;178728543 | chr2:179593272;179593271;179593270 |
N2A | 5217 | 15874;15875;15876 | chr2:178728545;178728544;178728543 | chr2:179593272;179593271;179593270 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs76771282 | -0.197 | 1.0 | D | 0.755 | 0.527 | 0.289847578895 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.61E-05 | None | 0 | None | 0 | 0 | 0 |
N/K | rs76771282 | -0.197 | 1.0 | D | 0.755 | 0.527 | 0.289847578895 | gnomAD-4.0.0 | 6.84733E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52704E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9982 | likely_pathogenic | 0.9983 | pathogenic | -0.97 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
N/C | 0.993 | likely_pathogenic | 0.9933 | pathogenic | -0.494 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
N/D | 0.9729 | likely_pathogenic | 0.9646 | pathogenic | -1.71 | Destabilizing | 0.999 | D | 0.639 | neutral | D | 0.543371412 | None | None | N |
N/E | 0.9984 | likely_pathogenic | 0.998 | pathogenic | -1.553 | Destabilizing | 0.999 | D | 0.739 | prob.delet. | None | None | None | None | N |
N/F | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -0.758 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
N/G | 0.9904 | likely_pathogenic | 0.9908 | pathogenic | -1.311 | Destabilizing | 0.999 | D | 0.577 | neutral | None | None | None | None | N |
N/H | 0.9915 | likely_pathogenic | 0.9907 | pathogenic | -0.947 | Destabilizing | 1.0 | D | 0.75 | deleterious | D | 0.556159749 | None | None | N |
N/I | 0.9982 | likely_pathogenic | 0.9973 | pathogenic | -0.089 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | D | 0.556413239 | None | None | N |
N/K | 0.9988 | likely_pathogenic | 0.9982 | pathogenic | -0.253 | Destabilizing | 1.0 | D | 0.755 | deleterious | D | 0.55565277 | None | None | N |
N/L | 0.9969 | likely_pathogenic | 0.9952 | pathogenic | -0.089 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
N/M | 0.9962 | likely_pathogenic | 0.9952 | pathogenic | 0.272 | Stabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
N/P | 0.9996 | likely_pathogenic | 0.9994 | pathogenic | -0.355 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
N/Q | 0.9992 | likely_pathogenic | 0.999 | pathogenic | -1.094 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
N/R | 0.9987 | likely_pathogenic | 0.9982 | pathogenic | -0.234 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
N/S | 0.9301 | likely_pathogenic | 0.9407 | pathogenic | -1.097 | Destabilizing | 0.999 | D | 0.6 | neutral | N | 0.507136449 | None | None | N |
N/T | 0.9784 | likely_pathogenic | 0.9779 | pathogenic | -0.762 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | N | 0.509391401 | None | None | N |
N/V | 0.9977 | likely_pathogenic | 0.9972 | pathogenic | -0.355 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
N/W | 0.9999 | likely_pathogenic | 0.9997 | pathogenic | -0.579 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | N |
N/Y | 0.9962 | likely_pathogenic | 0.9938 | pathogenic | -0.257 | Destabilizing | 1.0 | D | 0.762 | deleterious | D | 0.556159749 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.