Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6462 | 19609;19610;19611 | chr2:178728542;178728541;178728540 | chr2:179593269;179593268;179593267 |
N2AB | 6145 | 18658;18659;18660 | chr2:178728542;178728541;178728540 | chr2:179593269;179593268;179593267 |
N2A | 5218 | 15877;15878;15879 | chr2:178728542;178728541;178728540 | chr2:179593269;179593268;179593267 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | rs1419616263 | -0.114 | 0.896 | N | 0.405 | 0.336 | 0.416581338634 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.66889E-04 |
D/A | rs1419616263 | -0.114 | 0.896 | N | 0.405 | 0.336 | 0.416581338634 | gnomAD-4.0.0 | 2.05436E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00015E-07 | 1.1609E-05 | 1.6581E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1375 | likely_benign | 0.1506 | benign | -0.198 | Destabilizing | 0.896 | D | 0.405 | neutral | N | 0.519223455 | None | None | I |
D/C | 0.6857 | likely_pathogenic | 0.7226 | pathogenic | -0.038 | Destabilizing | 0.999 | D | 0.629 | neutral | None | None | None | None | I |
D/E | 0.1365 | likely_benign | 0.1475 | benign | -0.222 | Destabilizing | 0.026 | N | 0.251 | neutral | N | 0.470274715 | None | None | I |
D/F | 0.6437 | likely_pathogenic | 0.6651 | pathogenic | -0.086 | Destabilizing | 0.988 | D | 0.537 | neutral | None | None | None | None | I |
D/G | 0.204 | likely_benign | 0.206 | benign | -0.383 | Destabilizing | 0.896 | D | 0.351 | neutral | N | 0.499984334 | None | None | I |
D/H | 0.2958 | likely_benign | 0.3104 | benign | 0.216 | Stabilizing | 0.026 | N | 0.249 | neutral | N | 0.496194667 | None | None | I |
D/I | 0.2761 | likely_benign | 0.3001 | benign | 0.238 | Stabilizing | 0.988 | D | 0.527 | neutral | None | None | None | None | I |
D/K | 0.3074 | likely_benign | 0.3315 | benign | 0.376 | Stabilizing | 0.851 | D | 0.375 | neutral | None | None | None | None | I |
D/L | 0.3607 | ambiguous | 0.4065 | ambiguous | 0.238 | Stabilizing | 0.976 | D | 0.486 | neutral | None | None | None | None | I |
D/M | 0.5763 | likely_pathogenic | 0.607 | pathogenic | 0.243 | Stabilizing | 0.999 | D | 0.554 | neutral | None | None | None | None | I |
D/N | 0.1023 | likely_benign | 0.1101 | benign | 0.036 | Stabilizing | 0.896 | D | 0.353 | neutral | D | 0.528805731 | None | None | I |
D/P | 0.6212 | likely_pathogenic | 0.661 | pathogenic | 0.114 | Stabilizing | 0.988 | D | 0.358 | neutral | None | None | None | None | I |
D/Q | 0.3051 | likely_benign | 0.3312 | benign | 0.084 | Stabilizing | 0.952 | D | 0.286 | neutral | None | None | None | None | I |
D/R | 0.3347 | likely_benign | 0.3405 | ambiguous | 0.585 | Stabilizing | 0.976 | D | 0.428 | neutral | None | None | None | None | I |
D/S | 0.1203 | likely_benign | 0.1301 | benign | -0.063 | Destabilizing | 0.919 | D | 0.309 | neutral | None | None | None | None | I |
D/T | 0.2062 | likely_benign | 0.2339 | benign | 0.09 | Stabilizing | 0.919 | D | 0.347 | neutral | None | None | None | None | I |
D/V | 0.172 | likely_benign | 0.1856 | benign | 0.114 | Stabilizing | 0.984 | D | 0.489 | neutral | D | 0.533635547 | None | None | I |
D/W | 0.9176 | likely_pathogenic | 0.9165 | pathogenic | 0.049 | Stabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | I |
D/Y | 0.2593 | likely_benign | 0.257 | benign | 0.158 | Stabilizing | 0.968 | D | 0.531 | neutral | N | 0.482756722 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.