Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6463 | 19612;19613;19614 | chr2:178728539;178728538;178728537 | chr2:179593266;179593265;179593264 |
N2AB | 6146 | 18661;18662;18663 | chr2:178728539;178728538;178728537 | chr2:179593266;179593265;179593264 |
N2A | 5219 | 15880;15881;15882 | chr2:178728539;178728538;178728537 | chr2:179593266;179593265;179593264 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs267599062 | -0.092 | 0.704 | N | 0.296 | 0.197 | 0.265010934533 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
F/L | rs267599062 | -0.092 | 0.704 | N | 0.296 | 0.197 | 0.265010934533 | gnomAD-4.0.0 | 1.23278E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.53022E-05 | 0 | 1.65843E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.5036 | ambiguous | 0.5307 | ambiguous | -0.53 | Destabilizing | 0.863 | D | 0.538 | neutral | None | None | None | None | I |
F/C | 0.3713 | ambiguous | 0.4017 | ambiguous | -0.126 | Destabilizing | 0.999 | D | 0.591 | neutral | N | 0.51528186 | None | None | I |
F/D | 0.8718 | likely_pathogenic | 0.9004 | pathogenic | 0.906 | Stabilizing | 0.991 | D | 0.565 | neutral | None | None | None | None | I |
F/E | 0.9007 | likely_pathogenic | 0.9219 | pathogenic | 0.861 | Stabilizing | 0.997 | D | 0.568 | neutral | None | None | None | None | I |
F/G | 0.8533 | likely_pathogenic | 0.8683 | pathogenic | -0.675 | Destabilizing | 0.02 | N | 0.387 | neutral | None | None | None | None | I |
F/H | 0.5848 | likely_pathogenic | 0.6575 | pathogenic | 0.397 | Stabilizing | 0.999 | D | 0.539 | neutral | None | None | None | None | I |
F/I | 0.1997 | likely_benign | 0.2409 | benign | -0.197 | Destabilizing | 0.061 | N | 0.223 | neutral | N | 0.42348642 | None | None | I |
F/K | 0.8882 | likely_pathogenic | 0.9157 | pathogenic | 0.216 | Stabilizing | 0.991 | D | 0.57 | neutral | None | None | None | None | I |
F/L | 0.8749 | likely_pathogenic | 0.8895 | pathogenic | -0.197 | Destabilizing | 0.704 | D | 0.296 | neutral | N | 0.444168336 | None | None | I |
F/M | 0.6078 | likely_pathogenic | 0.6379 | pathogenic | -0.184 | Destabilizing | 0.991 | D | 0.443 | neutral | None | None | None | None | I |
F/N | 0.7623 | likely_pathogenic | 0.7935 | pathogenic | 0.281 | Stabilizing | 0.991 | D | 0.576 | neutral | None | None | None | None | I |
F/P | 0.9952 | likely_pathogenic | 0.9953 | pathogenic | -0.288 | Destabilizing | 0.997 | D | 0.569 | neutral | None | None | None | None | I |
F/Q | 0.8434 | likely_pathogenic | 0.8721 | pathogenic | 0.239 | Stabilizing | 0.997 | D | 0.567 | neutral | None | None | None | None | I |
F/R | 0.772 | likely_pathogenic | 0.8139 | pathogenic | 0.54 | Stabilizing | 0.997 | D | 0.569 | neutral | None | None | None | None | I |
F/S | 0.4375 | ambiguous | 0.465 | ambiguous | -0.322 | Destabilizing | 0.92 | D | 0.571 | neutral | N | 0.469008066 | None | None | I |
F/T | 0.5488 | ambiguous | 0.6132 | pathogenic | -0.275 | Destabilizing | 0.969 | D | 0.572 | neutral | None | None | None | None | I |
F/V | 0.1575 | likely_benign | 0.1911 | benign | -0.288 | Destabilizing | 0.704 | D | 0.481 | neutral | N | 0.355394558 | None | None | I |
F/W | 0.6196 | likely_pathogenic | 0.6535 | pathogenic | -0.272 | Destabilizing | 0.999 | D | 0.459 | neutral | None | None | None | None | I |
F/Y | 0.1778 | likely_benign | 0.1998 | benign | -0.155 | Destabilizing | 0.986 | D | 0.425 | neutral | N | 0.455156121 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.