Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6464 | 19615;19616;19617 | chr2:178728536;178728535;178728534 | chr2:179593263;179593262;179593261 |
N2AB | 6147 | 18664;18665;18666 | chr2:178728536;178728535;178728534 | chr2:179593263;179593262;179593261 |
N2A | 5220 | 15883;15884;15885 | chr2:178728536;178728535;178728534 | chr2:179593263;179593262;179593261 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | None | None | 0.998 | D | 0.767 | 0.741 | 0.632648996995 | gnomAD-4.0.0 | 1.59491E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86494E-06 | 0 | 0 |
G/R | rs755082868 | None | 1.0 | D | 0.763 | 0.691 | 0.621853638575 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
G/R | rs755082868 | None | 1.0 | D | 0.763 | 0.691 | 0.621853638575 | gnomAD-4.0.0 | 6.57505E-06 | None | None | None | None | I | None | 0 | 6.5591E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.7813 | likely_pathogenic | 0.7826 | pathogenic | -0.327 | Destabilizing | 0.962 | D | 0.505 | neutral | D | 0.631017737 | None | None | I |
G/C | 0.9311 | likely_pathogenic | 0.9269 | pathogenic | -0.897 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | I |
G/D | 0.9211 | likely_pathogenic | 0.924 | pathogenic | -0.707 | Destabilizing | 0.998 | D | 0.791 | deleterious | None | None | None | None | I |
G/E | 0.9608 | likely_pathogenic | 0.9565 | pathogenic | -0.881 | Destabilizing | 0.998 | D | 0.767 | deleterious | D | 0.538272299 | None | None | I |
G/F | 0.9853 | likely_pathogenic | 0.9839 | pathogenic | -1.124 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | I |
G/H | 0.9744 | likely_pathogenic | 0.9726 | pathogenic | -0.515 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | I |
G/I | 0.9802 | likely_pathogenic | 0.9759 | pathogenic | -0.529 | Destabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | I |
G/K | 0.9849 | likely_pathogenic | 0.9825 | pathogenic | -0.761 | Destabilizing | 0.998 | D | 0.764 | deleterious | None | None | None | None | I |
G/L | 0.9755 | likely_pathogenic | 0.9732 | pathogenic | -0.529 | Destabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | I |
G/M | 0.9906 | likely_pathogenic | 0.9902 | pathogenic | -0.482 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
G/N | 0.9556 | likely_pathogenic | 0.9604 | pathogenic | -0.45 | Destabilizing | 0.998 | D | 0.745 | deleterious | None | None | None | None | I |
G/P | 0.9977 | likely_pathogenic | 0.9974 | pathogenic | -0.431 | Destabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | I |
G/Q | 0.9568 | likely_pathogenic | 0.9552 | pathogenic | -0.776 | Destabilizing | 0.999 | D | 0.758 | deleterious | None | None | None | None | I |
G/R | 0.9441 | likely_pathogenic | 0.9379 | pathogenic | -0.274 | Destabilizing | 1.0 | D | 0.763 | deleterious | D | 0.631219541 | None | None | I |
G/S | 0.6232 | likely_pathogenic | 0.6431 | pathogenic | -0.564 | Destabilizing | 0.862 | D | 0.28 | neutral | None | None | None | None | I |
G/T | 0.9349 | likely_pathogenic | 0.9336 | pathogenic | -0.675 | Destabilizing | 0.996 | D | 0.773 | deleterious | None | None | None | None | I |
G/V | 0.9632 | likely_pathogenic | 0.9553 | pathogenic | -0.431 | Destabilizing | 0.999 | D | 0.759 | deleterious | D | 0.631824954 | None | None | I |
G/W | 0.9761 | likely_pathogenic | 0.9719 | pathogenic | -1.24 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | I |
G/Y | 0.9783 | likely_pathogenic | 0.9758 | pathogenic | -0.902 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.