Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6465 | 19618;19619;19620 | chr2:178728533;178728532;178728531 | chr2:179593260;179593259;179593258 |
N2AB | 6148 | 18667;18668;18669 | chr2:178728533;178728532;178728531 | chr2:179593260;179593259;179593258 |
N2A | 5221 | 15886;15887;15888 | chr2:178728533;178728532;178728531 | chr2:179593260;179593259;179593258 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | rs796474434 | None | 0.98 | D | 0.531 | 0.218 | 0.330589388543 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0867 | likely_benign | 0.0879 | benign | -0.386 | Destabilizing | 0.304 | N | 0.182 | neutral | None | None | None | None | N |
S/C | 0.1292 | likely_benign | 0.1304 | benign | -0.204 | Destabilizing | 1.0 | D | 0.612 | neutral | N | 0.497964596 | None | None | N |
S/D | 0.3818 | ambiguous | 0.378 | ambiguous | -0.124 | Destabilizing | 0.985 | D | 0.514 | neutral | None | None | None | None | N |
S/E | 0.4104 | ambiguous | 0.4029 | ambiguous | -0.234 | Destabilizing | 0.97 | D | 0.514 | neutral | None | None | None | None | N |
S/F | 0.1351 | likely_benign | 0.1451 | benign | -1.091 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | None | None | None | None | N |
S/G | 0.1335 | likely_benign | 0.1281 | benign | -0.456 | Destabilizing | 0.925 | D | 0.461 | neutral | N | 0.494975628 | None | None | N |
S/H | 0.2973 | likely_benign | 0.2995 | benign | -1.025 | Destabilizing | 1.0 | D | 0.594 | neutral | None | None | None | None | N |
S/I | 0.1265 | likely_benign | 0.1175 | benign | -0.33 | Destabilizing | 0.994 | D | 0.679 | prob.neutral | N | 0.485367296 | None | None | N |
S/K | 0.5681 | likely_pathogenic | 0.5493 | ambiguous | -0.396 | Destabilizing | 0.942 | D | 0.495 | neutral | None | None | None | None | N |
S/L | 0.1032 | likely_benign | 0.0974 | benign | -0.33 | Destabilizing | 0.97 | D | 0.622 | neutral | None | None | None | None | N |
S/M | 0.1788 | likely_benign | 0.1842 | benign | 0.079 | Stabilizing | 1.0 | D | 0.595 | neutral | None | None | None | None | N |
S/N | 0.1331 | likely_benign | 0.129 | benign | -0.104 | Destabilizing | 0.98 | D | 0.531 | neutral | D | 0.529557879 | None | None | N |
S/P | 0.7403 | likely_pathogenic | 0.7015 | pathogenic | -0.323 | Destabilizing | 0.996 | D | 0.59 | neutral | None | None | None | None | N |
S/Q | 0.4083 | ambiguous | 0.3938 | ambiguous | -0.445 | Destabilizing | 0.991 | D | 0.541 | neutral | None | None | None | None | N |
S/R | 0.4711 | ambiguous | 0.4344 | ambiguous | -0.152 | Destabilizing | 0.151 | N | 0.311 | neutral | N | 0.483150799 | None | None | N |
S/T | 0.0769 | likely_benign | 0.0802 | benign | -0.214 | Destabilizing | 0.961 | D | 0.491 | neutral | N | 0.518532809 | None | None | N |
S/V | 0.1339 | likely_benign | 0.1346 | benign | -0.323 | Destabilizing | 0.991 | D | 0.597 | neutral | None | None | None | None | N |
S/W | 0.3176 | likely_benign | 0.3162 | benign | -1.085 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
S/Y | 0.1594 | likely_benign | 0.1587 | benign | -0.803 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.