Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6466 | 19621;19622;19623 | chr2:178728530;178728529;178728528 | chr2:179593257;179593256;179593255 |
N2AB | 6149 | 18670;18671;18672 | chr2:178728530;178728529;178728528 | chr2:179593257;179593256;179593255 |
N2A | 5222 | 15889;15890;15891 | chr2:178728530;178728529;178728528 | chr2:179593257;179593256;179593255 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.959 | N | 0.477 | 0.37 | 0.254244900254 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0886 | likely_benign | 0.0926 | benign | -0.675 | Destabilizing | 0.733 | D | 0.395 | neutral | None | None | None | None | N |
S/C | 0.1399 | likely_benign | 0.1518 | benign | -0.528 | Destabilizing | 0.035 | N | 0.293 | neutral | D | 0.536118492 | None | None | N |
S/D | 0.3304 | likely_benign | 0.3462 | ambiguous | -0.026 | Destabilizing | 0.969 | D | 0.553 | neutral | None | None | None | None | N |
S/E | 0.6305 | likely_pathogenic | 0.6201 | pathogenic | -0.049 | Destabilizing | 0.969 | D | 0.553 | neutral | None | None | None | None | N |
S/F | 0.3279 | likely_benign | 0.3256 | benign | -0.952 | Destabilizing | 0.997 | D | 0.633 | neutral | None | None | None | None | N |
S/G | 0.1528 | likely_benign | 0.145 | benign | -0.896 | Destabilizing | 0.959 | D | 0.477 | neutral | N | 0.496519337 | None | None | N |
S/H | 0.4685 | ambiguous | 0.4789 | ambiguous | -1.372 | Destabilizing | 0.999 | D | 0.543 | neutral | None | None | None | None | N |
S/I | 0.2783 | likely_benign | 0.2607 | benign | -0.203 | Destabilizing | 0.976 | D | 0.621 | neutral | N | 0.507489096 | None | None | N |
S/K | 0.816 | likely_pathogenic | 0.8101 | pathogenic | -0.649 | Destabilizing | 0.969 | D | 0.552 | neutral | None | None | None | None | N |
S/L | 0.176 | likely_benign | 0.1715 | benign | -0.203 | Destabilizing | 0.939 | D | 0.573 | neutral | None | None | None | None | N |
S/M | 0.3506 | ambiguous | 0.357 | ambiguous | 0.015 | Stabilizing | 0.997 | D | 0.555 | neutral | None | None | None | None | N |
S/N | 0.2023 | likely_benign | 0.1882 | benign | -0.564 | Destabilizing | 0.959 | D | 0.562 | neutral | N | 0.495505379 | None | None | N |
S/P | 0.9627 | likely_pathogenic | 0.9599 | pathogenic | -0.327 | Destabilizing | 0.997 | D | 0.585 | neutral | None | None | None | None | N |
S/Q | 0.6402 | likely_pathogenic | 0.6262 | pathogenic | -0.73 | Destabilizing | 0.997 | D | 0.566 | neutral | None | None | None | None | N |
S/R | 0.7331 | likely_pathogenic | 0.7122 | pathogenic | -0.529 | Destabilizing | 0.988 | D | 0.588 | neutral | N | 0.487845604 | None | None | N |
S/T | 0.1183 | likely_benign | 0.1206 | benign | -0.618 | Destabilizing | 0.134 | N | 0.186 | neutral | N | 0.51181748 | None | None | N |
S/V | 0.2439 | likely_benign | 0.245 | benign | -0.327 | Destabilizing | 0.939 | D | 0.605 | neutral | None | None | None | None | N |
S/W | 0.6353 | likely_pathogenic | 0.61 | pathogenic | -0.91 | Destabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | N |
S/Y | 0.3068 | likely_benign | 0.2926 | benign | -0.645 | Destabilizing | 0.997 | D | 0.623 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.