Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6467 | 19624;19625;19626 | chr2:178728527;178728526;178728525 | chr2:179593254;179593253;179593252 |
N2AB | 6150 | 18673;18674;18675 | chr2:178728527;178728526;178728525 | chr2:179593254;179593253;179593252 |
N2A | 5223 | 15892;15893;15894 | chr2:178728527;178728526;178728525 | chr2:179593254;179593253;179593252 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/I | None | None | 0.023 | D | 0.479 | 0.398 | 0.64410640661 | gnomAD-4.0.0 | 6.85099E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00343E-07 | 0 | 0 |
S/R | rs1454652385 | -0.286 | 0.642 | N | 0.563 | 0.371 | 0.360163838653 | gnomAD-4.0.0 | 1.59575E-06 | None | None | None | None | N | None | 0 | 2.29537E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.091 | likely_benign | 0.089 | benign | -0.646 | Destabilizing | 0.176 | N | 0.339 | neutral | None | None | None | None | N |
S/C | 0.1513 | likely_benign | 0.1506 | benign | -0.425 | Destabilizing | 0.013 | N | 0.337 | neutral | D | 0.551872514 | None | None | N |
S/D | 0.5295 | ambiguous | 0.4555 | ambiguous | 0.058 | Stabilizing | 0.543 | D | 0.471 | neutral | None | None | None | None | N |
S/E | 0.5041 | ambiguous | 0.4629 | ambiguous | 0.023 | Stabilizing | 0.543 | D | 0.481 | neutral | None | None | None | None | N |
S/F | 0.1662 | likely_benign | 0.1391 | benign | -0.955 | Destabilizing | 0.944 | D | 0.601 | neutral | None | None | None | None | N |
S/G | 0.1966 | likely_benign | 0.161 | benign | -0.856 | Destabilizing | 0.425 | N | 0.475 | neutral | D | 0.551112045 | None | None | N |
S/H | 0.3412 | ambiguous | 0.3113 | benign | -1.328 | Destabilizing | 0.944 | D | 0.554 | neutral | None | None | None | None | N |
S/I | 0.1708 | likely_benign | 0.1421 | benign | -0.207 | Destabilizing | 0.023 | N | 0.479 | neutral | D | 0.52848834 | None | None | N |
S/K | 0.6803 | likely_pathogenic | 0.6219 | pathogenic | -0.649 | Destabilizing | 0.543 | D | 0.471 | neutral | None | None | None | None | N |
S/L | 0.1202 | likely_benign | 0.1019 | benign | -0.207 | Destabilizing | 0.329 | N | 0.499 | neutral | None | None | None | None | N |
S/M | 0.2183 | likely_benign | 0.2081 | benign | 0.011 | Stabilizing | 0.944 | D | 0.553 | neutral | None | None | None | None | N |
S/N | 0.2268 | likely_benign | 0.1802 | benign | -0.489 | Destabilizing | 0.023 | N | 0.24 | neutral | N | 0.489215183 | None | None | N |
S/P | 0.8874 | likely_pathogenic | 0.8101 | pathogenic | -0.32 | Destabilizing | 0.944 | D | 0.58 | neutral | None | None | None | None | N |
S/Q | 0.4816 | ambiguous | 0.4499 | ambiguous | -0.65 | Destabilizing | 0.085 | N | 0.323 | neutral | None | None | None | None | N |
S/R | 0.5764 | likely_pathogenic | 0.4935 | ambiguous | -0.516 | Destabilizing | 0.642 | D | 0.563 | neutral | N | 0.506901365 | None | None | N |
S/T | 0.0774 | likely_benign | 0.0762 | benign | -0.549 | Destabilizing | 0.023 | N | 0.215 | neutral | N | 0.508755745 | None | None | N |
S/V | 0.1573 | likely_benign | 0.1483 | benign | -0.32 | Destabilizing | 0.329 | N | 0.51 | neutral | None | None | None | None | N |
S/W | 0.3857 | ambiguous | 0.3277 | benign | -0.928 | Destabilizing | 0.995 | D | 0.647 | neutral | None | None | None | None | N |
S/Y | 0.1945 | likely_benign | 0.1615 | benign | -0.669 | Destabilizing | 0.981 | D | 0.597 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.