Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6468 | 19627;19628;19629 | chr2:178728524;178728523;178728522 | chr2:179593251;179593250;179593249 |
N2AB | 6151 | 18676;18677;18678 | chr2:178728524;178728523;178728522 | chr2:179593251;179593250;179593249 |
N2A | 5224 | 15895;15896;15897 | chr2:178728524;178728523;178728522 | chr2:179593251;179593250;179593249 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/S | rs776818687 | -1.571 | 1.0 | N | 0.811 | 0.538 | 0.728107646935 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 2.92E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
C/S | rs776818687 | -1.571 | 1.0 | N | 0.811 | 0.538 | 0.728107646935 | gnomAD-4.0.0 | 3.19324E-06 | None | None | None | None | N | None | 0 | 2.29589E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43823E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.5697 | likely_pathogenic | 0.6207 | pathogenic | -1.868 | Destabilizing | 0.998 | D | 0.601 | neutral | None | None | None | None | N |
C/D | 0.8757 | likely_pathogenic | 0.9049 | pathogenic | -0.361 | Destabilizing | 1.0 | D | 0.914 | deleterious | None | None | None | None | N |
C/E | 0.9356 | likely_pathogenic | 0.9532 | pathogenic | -0.25 | Destabilizing | 1.0 | D | 0.926 | deleterious | None | None | None | None | N |
C/F | 0.4488 | ambiguous | 0.5374 | ambiguous | -1.27 | Destabilizing | 1.0 | D | 0.923 | deleterious | N | 0.512786714 | None | None | N |
C/G | 0.3638 | ambiguous | 0.3755 | ambiguous | -2.181 | Highly Destabilizing | 1.0 | D | 0.865 | deleterious | N | 0.503076249 | None | None | N |
C/H | 0.8259 | likely_pathogenic | 0.8622 | pathogenic | -2.166 | Highly Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
C/I | 0.7747 | likely_pathogenic | 0.8212 | pathogenic | -1.058 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
C/K | 0.9529 | likely_pathogenic | 0.9673 | pathogenic | -0.912 | Destabilizing | 1.0 | D | 0.91 | deleterious | None | None | None | None | N |
C/L | 0.7612 | likely_pathogenic | 0.808 | pathogenic | -1.058 | Destabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | N |
C/M | 0.8029 | likely_pathogenic | 0.8526 | pathogenic | -0.136 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
C/N | 0.8139 | likely_pathogenic | 0.8469 | pathogenic | -0.938 | Destabilizing | 1.0 | D | 0.926 | deleterious | None | None | None | None | N |
C/P | 0.9967 | likely_pathogenic | 0.9966 | pathogenic | -1.303 | Destabilizing | 1.0 | D | 0.925 | deleterious | None | None | None | None | N |
C/Q | 0.856 | likely_pathogenic | 0.8909 | pathogenic | -0.83 | Destabilizing | 1.0 | D | 0.919 | deleterious | None | None | None | None | N |
C/R | 0.7708 | likely_pathogenic | 0.8132 | pathogenic | -0.827 | Destabilizing | 1.0 | D | 0.926 | deleterious | N | 0.488326129 | None | None | N |
C/S | 0.37 | ambiguous | 0.3975 | ambiguous | -1.503 | Destabilizing | 1.0 | D | 0.811 | deleterious | N | 0.510006539 | None | None | N |
C/T | 0.5488 | ambiguous | 0.6041 | pathogenic | -1.199 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
C/V | 0.636 | likely_pathogenic | 0.701 | pathogenic | -1.303 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | N |
C/W | 0.7955 | likely_pathogenic | 0.8401 | pathogenic | -1.236 | Destabilizing | 1.0 | D | 0.906 | deleterious | N | 0.521940973 | None | None | N |
C/Y | 0.6924 | likely_pathogenic | 0.7571 | pathogenic | -1.224 | Destabilizing | 1.0 | D | 0.924 | deleterious | N | 0.516661054 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.