Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6472 | 19639;19640;19641 | chr2:178728512;178728511;178728510 | chr2:179593239;179593238;179593237 |
N2AB | 6155 | 18688;18689;18690 | chr2:178728512;178728511;178728510 | chr2:179593239;179593238;179593237 |
N2A | 5228 | 15907;15908;15909 | chr2:178728512;178728511;178728510 | chr2:179593239;179593238;179593237 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.992 | D | 0.639 | 0.295 | 0.471941563831 | gnomAD-4.0.0 | 1.60041E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87783E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8967 | likely_pathogenic | 0.8855 | pathogenic | -2.721 | Highly Destabilizing | 0.997 | D | 0.692 | prob.neutral | None | None | None | None | N |
L/C | 0.8484 | likely_pathogenic | 0.8511 | pathogenic | -2.19 | Highly Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
L/D | 0.9989 | likely_pathogenic | 0.9986 | pathogenic | -2.999 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
L/E | 0.9914 | likely_pathogenic | 0.9888 | pathogenic | -2.739 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
L/F | 0.3415 | ambiguous | 0.3137 | benign | -1.637 | Destabilizing | 0.999 | D | 0.835 | deleterious | N | 0.510755116 | None | None | N |
L/G | 0.9814 | likely_pathogenic | 0.9796 | pathogenic | -3.314 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
L/H | 0.9665 | likely_pathogenic | 0.9591 | pathogenic | -2.757 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
L/I | 0.1025 | likely_benign | 0.1023 | benign | -0.987 | Destabilizing | 0.992 | D | 0.639 | neutral | D | 0.525047776 | None | None | N |
L/K | 0.9853 | likely_pathogenic | 0.9831 | pathogenic | -2.094 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
L/M | 0.285 | likely_benign | 0.273 | benign | -1.064 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
L/N | 0.9922 | likely_pathogenic | 0.9908 | pathogenic | -2.537 | Highly Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
L/P | 0.9884 | likely_pathogenic | 0.9856 | pathogenic | -1.548 | Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
L/Q | 0.9527 | likely_pathogenic | 0.9451 | pathogenic | -2.341 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
L/R | 0.9633 | likely_pathogenic | 0.9592 | pathogenic | -1.87 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
L/S | 0.9786 | likely_pathogenic | 0.9724 | pathogenic | -3.29 | Highly Destabilizing | 0.999 | D | 0.883 | deleterious | D | 0.546256064 | None | None | N |
L/T | 0.9324 | likely_pathogenic | 0.9152 | pathogenic | -2.866 | Highly Destabilizing | 0.999 | D | 0.823 | deleterious | None | None | None | None | N |
L/V | 0.1201 | likely_benign | 0.1147 | benign | -1.548 | Destabilizing | 0.767 | D | 0.383 | neutral | N | 0.477136398 | None | None | N |
L/W | 0.8777 | likely_pathogenic | 0.8608 | pathogenic | -2.008 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
L/Y | 0.9161 | likely_pathogenic | 0.9094 | pathogenic | -1.742 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.