Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6473 | 19642;19643;19644 | chr2:178728509;178728508;178728507 | chr2:179593236;179593235;179593234 |
N2AB | 6156 | 18691;18692;18693 | chr2:178728509;178728508;178728507 | chr2:179593236;179593235;179593234 |
N2A | 5229 | 15910;15911;15912 | chr2:178728509;178728508;178728507 | chr2:179593236;179593235;179593234 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/I | rs747454325 | 0.26 | 0.006 | N | 0.171 | 0.322 | 0.494500980894 | gnomAD-2.1.1 | 1.8E-05 | None | None | None | None | N | None | 2.08229E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
R/I | rs747454325 | 0.26 | 0.006 | N | 0.171 | 0.322 | 0.494500980894 | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 1.20674E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
R/I | rs747454325 | 0.26 | 0.006 | N | 0.171 | 0.322 | 0.494500980894 | gnomAD-4.0.0 | 6.21323E-06 | None | None | None | None | N | None | 1.33647E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.2563 | likely_benign | 0.2679 | benign | -0.439 | Destabilizing | 0.111 | N | 0.223 | neutral | None | None | None | None | N |
R/C | 0.1967 | likely_benign | 0.1963 | benign | -0.474 | Destabilizing | 0.968 | D | 0.346 | neutral | None | None | None | None | N |
R/D | 0.4495 | ambiguous | 0.4484 | ambiguous | 0.148 | Stabilizing | 0.002 | N | 0.125 | neutral | None | None | None | None | N |
R/E | 0.2374 | likely_benign | 0.2435 | benign | 0.236 | Stabilizing | 0.223 | N | 0.203 | neutral | None | None | None | None | N |
R/F | 0.4588 | ambiguous | 0.4691 | ambiguous | -0.53 | Destabilizing | 0.738 | D | 0.443 | neutral | None | None | None | None | N |
R/G | 0.2207 | likely_benign | 0.2297 | benign | -0.683 | Destabilizing | 0.086 | N | 0.317 | neutral | N | 0.504640792 | None | None | N |
R/H | 0.0748 | likely_benign | 0.0749 | benign | -1.026 | Destabilizing | 0.908 | D | 0.319 | neutral | None | None | None | None | N |
R/I | 0.1993 | likely_benign | 0.2062 | benign | 0.186 | Stabilizing | 0.006 | N | 0.171 | neutral | N | 0.405708736 | None | None | N |
R/K | 0.0839 | likely_benign | 0.0826 | benign | -0.354 | Destabilizing | 0.302 | N | 0.229 | neutral | N | 0.435239422 | None | None | N |
R/L | 0.1877 | likely_benign | 0.1861 | benign | 0.186 | Stabilizing | 0.111 | N | 0.273 | neutral | None | None | None | None | N |
R/M | 0.1959 | likely_benign | 0.2023 | benign | -0.155 | Destabilizing | 0.908 | D | 0.338 | neutral | None | None | None | None | N |
R/N | 0.2906 | likely_benign | 0.2867 | benign | 0.071 | Stabilizing | 0.001 | N | 0.068 | neutral | None | None | None | None | N |
R/P | 0.8547 | likely_pathogenic | 0.8544 | pathogenic | -0.002 | Destabilizing | 0.738 | D | 0.47 | neutral | None | None | None | None | N |
R/Q | 0.0882 | likely_benign | 0.0892 | benign | -0.119 | Destabilizing | 0.582 | D | 0.365 | neutral | None | None | None | None | N |
R/S | 0.2381 | likely_benign | 0.2626 | benign | -0.595 | Destabilizing | 0.086 | N | 0.265 | neutral | N | 0.444168336 | None | None | N |
R/T | 0.0995 | likely_benign | 0.1099 | benign | -0.346 | Destabilizing | 0.002 | N | 0.12 | neutral | N | 0.356317278 | None | None | N |
R/V | 0.2433 | likely_benign | 0.2546 | benign | -0.002 | Destabilizing | 0.008 | N | 0.163 | neutral | None | None | None | None | N |
R/W | 0.1828 | likely_benign | 0.1895 | benign | -0.356 | Destabilizing | 0.991 | D | 0.343 | neutral | None | None | None | None | N |
R/Y | 0.3133 | likely_benign | 0.3131 | benign | 0.004 | Stabilizing | 0.896 | D | 0.403 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.