Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6474 | 19645;19646;19647 | chr2:178728506;178728505;178728504 | chr2:179593233;179593232;179593231 |
N2AB | 6157 | 18694;18695;18696 | chr2:178728506;178728505;178728504 | chr2:179593233;179593232;179593231 |
N2A | 5230 | 15913;15914;15915 | chr2:178728506;178728505;178728504 | chr2:179593233;179593232;179593231 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | None | None | 0.999 | D | 0.833 | 0.73 | 0.764583988284 | gnomAD-4.0.0 | 1.60553E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.88885E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9067 | likely_pathogenic | 0.8778 | pathogenic | -1.9 | Destabilizing | 0.998 | D | 0.688 | prob.neutral | D | 0.610392572 | None | None | N |
V/C | 0.9832 | likely_pathogenic | 0.9801 | pathogenic | -1.455 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
V/D | 0.9919 | likely_pathogenic | 0.9876 | pathogenic | -2.173 | Highly Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
V/E | 0.9785 | likely_pathogenic | 0.9697 | pathogenic | -2.097 | Highly Destabilizing | 1.0 | D | 0.818 | deleterious | D | 0.636303932 | None | None | N |
V/F | 0.8947 | likely_pathogenic | 0.8684 | pathogenic | -1.294 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
V/G | 0.9062 | likely_pathogenic | 0.8764 | pathogenic | -2.298 | Highly Destabilizing | 1.0 | D | 0.799 | deleterious | D | 0.636303932 | None | None | N |
V/H | 0.9954 | likely_pathogenic | 0.9935 | pathogenic | -1.855 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
V/I | 0.14 | likely_benign | 0.1344 | benign | -0.855 | Destabilizing | 0.813 | D | 0.567 | neutral | None | None | None | None | N |
V/K | 0.9868 | likely_pathogenic | 0.9821 | pathogenic | -1.533 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
V/L | 0.8444 | likely_pathogenic | 0.797 | pathogenic | -0.855 | Destabilizing | 0.981 | D | 0.703 | prob.neutral | D | 0.55497666 | None | None | N |
V/M | 0.844 | likely_pathogenic | 0.8221 | pathogenic | -0.803 | Destabilizing | 0.999 | D | 0.833 | deleterious | D | 0.635900324 | None | None | N |
V/N | 0.9748 | likely_pathogenic | 0.9657 | pathogenic | -1.496 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
V/P | 0.9752 | likely_pathogenic | 0.9693 | pathogenic | -1.172 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
V/Q | 0.9856 | likely_pathogenic | 0.9811 | pathogenic | -1.588 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
V/R | 0.9803 | likely_pathogenic | 0.974 | pathogenic | -1.112 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
V/S | 0.9495 | likely_pathogenic | 0.9358 | pathogenic | -2.066 | Highly Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
V/T | 0.9263 | likely_pathogenic | 0.9044 | pathogenic | -1.877 | Destabilizing | 0.998 | D | 0.757 | deleterious | None | None | None | None | N |
V/W | 0.9979 | likely_pathogenic | 0.9968 | pathogenic | -1.595 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
V/Y | 0.9864 | likely_pathogenic | 0.9815 | pathogenic | -1.295 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.