Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6482 | 19669;19670;19671 | chr2:178728380;178728379;178728378 | chr2:179593107;179593106;179593105 |
N2AB | 6165 | 18718;18719;18720 | chr2:178728380;178728379;178728378 | chr2:179593107;179593106;179593105 |
N2A | 5238 | 15937;15938;15939 | chr2:178728380;178728379;178728378 | chr2:179593107;179593106;179593105 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | rs1560758702 | None | 0.989 | N | 0.349 | 0.414 | 0.331619326243 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0792 | likely_benign | 0.0746 | benign | -0.649 | Destabilizing | 0.454 | N | 0.357 | neutral | D | 0.534904984 | None | None | N |
S/C | 0.116 | likely_benign | 0.1161 | benign | -0.392 | Destabilizing | 0.998 | D | 0.347 | neutral | None | None | None | None | N |
S/D | 0.529 | ambiguous | 0.4653 | ambiguous | 0.619 | Stabilizing | 0.728 | D | 0.35 | neutral | None | None | None | None | N |
S/E | 0.557 | ambiguous | 0.4787 | ambiguous | 0.579 | Stabilizing | 0.842 | D | 0.341 | neutral | None | None | None | None | N |
S/F | 0.1247 | likely_benign | 0.1201 | benign | -1.107 | Destabilizing | 0.949 | D | 0.403 | neutral | None | None | None | None | N |
S/G | 0.1436 | likely_benign | 0.132 | benign | -0.821 | Destabilizing | 0.842 | D | 0.329 | neutral | None | None | None | None | N |
S/H | 0.3016 | likely_benign | 0.2793 | benign | -1.211 | Destabilizing | 0.993 | D | 0.342 | neutral | None | None | None | None | N |
S/I | 0.1131 | likely_benign | 0.1124 | benign | -0.313 | Destabilizing | 0.728 | D | 0.338 | neutral | None | None | None | None | N |
S/K | 0.5876 | likely_pathogenic | 0.4907 | ambiguous | -0.247 | Destabilizing | 0.842 | D | 0.34 | neutral | None | None | None | None | N |
S/L | 0.0798 | likely_benign | 0.082 | benign | -0.313 | Destabilizing | 0.012 | N | 0.308 | neutral | N | 0.495202664 | None | None | N |
S/M | 0.1712 | likely_benign | 0.1767 | benign | -0.154 | Destabilizing | 0.949 | D | 0.351 | neutral | None | None | None | None | N |
S/N | 0.1822 | likely_benign | 0.1823 | benign | -0.121 | Destabilizing | 0.067 | N | 0.187 | neutral | None | None | None | None | N |
S/P | 0.9124 | likely_pathogenic | 0.8471 | pathogenic | -0.394 | Destabilizing | 0.989 | D | 0.349 | neutral | N | 0.495456154 | None | None | N |
S/Q | 0.4503 | ambiguous | 0.4073 | ambiguous | -0.264 | Destabilizing | 0.974 | D | 0.397 | neutral | None | None | None | None | N |
S/R | 0.4641 | ambiguous | 0.3758 | ambiguous | -0.167 | Destabilizing | 0.974 | D | 0.359 | neutral | None | None | None | None | N |
S/T | 0.0648 | likely_benign | 0.0718 | benign | -0.265 | Destabilizing | 0.801 | D | 0.377 | neutral | N | 0.513529634 | None | None | N |
S/V | 0.1144 | likely_benign | 0.1176 | benign | -0.394 | Destabilizing | 0.016 | N | 0.286 | neutral | None | None | None | None | N |
S/W | 0.348 | ambiguous | 0.2688 | benign | -1.052 | Destabilizing | 0.998 | D | 0.578 | neutral | None | None | None | None | N |
S/Y | 0.151 | likely_benign | 0.1259 | benign | -0.767 | Destabilizing | 0.974 | D | 0.399 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.