Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6484 | 19675;19676;19677 | chr2:178728374;178728373;178728372 | chr2:179593101;179593100;179593099 |
N2AB | 6167 | 18724;18725;18726 | chr2:178728374;178728373;178728372 | chr2:179593101;179593100;179593099 |
N2A | 5240 | 15943;15944;15945 | chr2:178728374;178728373;178728372 | chr2:179593101;179593100;179593099 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1425867664 | -0.585 | 0.78 | N | 0.379 | 0.16 | 0.117506650769 | gnomAD-2.1.1 | 4.28E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.82E-05 | None | 0 | None | 0 | 0 | 0 |
T/A | rs1425867664 | -0.585 | 0.78 | N | 0.379 | 0.16 | 0.117506650769 | gnomAD-4.0.0 | 1.62217E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.79189E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1233 | likely_benign | 0.1101 | benign | -0.602 | Destabilizing | 0.78 | D | 0.379 | neutral | N | 0.467315136 | None | None | N |
T/C | 0.5555 | ambiguous | 0.5881 | pathogenic | -0.366 | Destabilizing | 0.999 | D | 0.494 | neutral | None | None | None | None | N |
T/D | 0.4835 | ambiguous | 0.4549 | ambiguous | 0.529 | Stabilizing | 0.996 | D | 0.47 | neutral | None | None | None | None | N |
T/E | 0.3501 | ambiguous | 0.3116 | benign | 0.495 | Stabilizing | 0.996 | D | 0.464 | neutral | None | None | None | None | N |
T/F | 0.285 | likely_benign | 0.2924 | benign | -0.923 | Destabilizing | 0.976 | D | 0.54 | neutral | None | None | None | None | N |
T/G | 0.3588 | ambiguous | 0.3407 | ambiguous | -0.788 | Destabilizing | 0.996 | D | 0.461 | neutral | None | None | None | None | N |
T/H | 0.3283 | likely_benign | 0.3281 | benign | -0.967 | Destabilizing | 0.999 | D | 0.555 | neutral | None | None | None | None | N |
T/I | 0.1326 | likely_benign | 0.1388 | benign | -0.217 | Destabilizing | 0.011 | N | 0.183 | neutral | N | 0.442412457 | None | None | N |
T/K | 0.277 | likely_benign | 0.2406 | benign | -0.305 | Destabilizing | 0.988 | D | 0.467 | neutral | None | None | None | None | N |
T/L | 0.0937 | likely_benign | 0.0976 | benign | -0.217 | Destabilizing | 0.702 | D | 0.366 | neutral | None | None | None | None | N |
T/M | 0.1071 | likely_benign | 0.1046 | benign | -0.094 | Destabilizing | 0.976 | D | 0.496 | neutral | None | None | None | None | N |
T/N | 0.1697 | likely_benign | 0.1751 | benign | -0.198 | Destabilizing | 0.995 | D | 0.463 | neutral | N | 0.484458339 | None | None | N |
T/P | 0.28 | likely_benign | 0.2392 | benign | -0.314 | Destabilizing | 0.995 | D | 0.498 | neutral | N | 0.502816084 | None | None | N |
T/Q | 0.256 | likely_benign | 0.2362 | benign | -0.349 | Destabilizing | 0.996 | D | 0.487 | neutral | None | None | None | None | N |
T/R | 0.2073 | likely_benign | 0.1778 | benign | -0.08 | Destabilizing | 0.996 | D | 0.507 | neutral | None | None | None | None | N |
T/S | 0.1372 | likely_benign | 0.1397 | benign | -0.531 | Destabilizing | 0.946 | D | 0.413 | neutral | N | 0.501154117 | None | None | N |
T/V | 0.1336 | likely_benign | 0.1393 | benign | -0.314 | Destabilizing | 0.507 | D | 0.291 | neutral | None | None | None | None | N |
T/W | 0.6369 | likely_pathogenic | 0.6181 | pathogenic | -0.873 | Destabilizing | 0.999 | D | 0.633 | neutral | None | None | None | None | N |
T/Y | 0.3822 | ambiguous | 0.3703 | ambiguous | -0.605 | Destabilizing | 0.996 | D | 0.543 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.