Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6486 | 19681;19682;19683 | chr2:178728368;178728367;178728366 | chr2:179593095;179593094;179593093 |
N2AB | 6169 | 18730;18731;18732 | chr2:178728368;178728367;178728366 | chr2:179593095;179593094;179593093 |
N2A | 5242 | 15949;15950;15951 | chr2:178728368;178728367;178728366 | chr2:179593095;179593094;179593093 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | None | None | 0.884 | D | 0.451 | 0.261 | 0.290962096972 | gnomAD-4.0.0 | 1.619E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.79002E-05 | None | 0 | 0 | 0 | 0 | 0 |
K/R | rs1168625867 | -0.262 | 0.007 | N | 0.183 | 0.187 | 0.297718772494 | gnomAD-2.1.1 | 4.26E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.37E-06 | 0 |
K/R | rs1168625867 | -0.262 | 0.007 | N | 0.183 | 0.187 | 0.297718772494 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/R | rs1168625867 | -0.262 | 0.007 | N | 0.183 | 0.187 | 0.297718772494 | gnomAD-4.0.0 | 6.8615E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.35691E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3462 | ambiguous | 0.4211 | ambiguous | -0.469 | Destabilizing | 0.543 | D | 0.419 | neutral | None | None | None | None | N |
K/C | 0.7484 | likely_pathogenic | 0.829 | pathogenic | -0.43 | Destabilizing | 0.996 | D | 0.577 | neutral | None | None | None | None | N |
K/D | 0.5825 | likely_pathogenic | 0.6692 | pathogenic | 0.36 | Stabilizing | 0.854 | D | 0.491 | neutral | None | None | None | None | N |
K/E | 0.2136 | likely_benign | 0.2464 | benign | 0.454 | Stabilizing | 0.684 | D | 0.381 | neutral | N | 0.484251206 | None | None | N |
K/F | 0.754 | likely_pathogenic | 0.8073 | pathogenic | -0.26 | Destabilizing | 0.984 | D | 0.552 | neutral | None | None | None | None | N |
K/G | 0.4432 | ambiguous | 0.5143 | ambiguous | -0.787 | Destabilizing | 0.004 | N | 0.297 | neutral | None | None | None | None | N |
K/H | 0.326 | likely_benign | 0.4098 | ambiguous | -0.972 | Destabilizing | 0.953 | D | 0.507 | neutral | None | None | None | None | N |
K/I | 0.3804 | ambiguous | 0.4313 | ambiguous | 0.336 | Stabilizing | 0.939 | D | 0.568 | neutral | N | 0.514116613 | None | None | N |
K/L | 0.3697 | ambiguous | 0.4339 | ambiguous | 0.336 | Stabilizing | 0.742 | D | 0.554 | neutral | None | None | None | None | N |
K/M | 0.2186 | likely_benign | 0.2549 | benign | 0.085 | Stabilizing | 0.996 | D | 0.503 | neutral | None | None | None | None | N |
K/N | 0.35 | ambiguous | 0.4373 | ambiguous | -0.089 | Destabilizing | 0.684 | D | 0.425 | neutral | N | 0.519511891 | None | None | N |
K/P | 0.358 | ambiguous | 0.4388 | ambiguous | 0.097 | Stabilizing | 0.004 | N | 0.207 | neutral | None | None | None | None | N |
K/Q | 0.1329 | likely_benign | 0.1577 | benign | -0.141 | Destabilizing | 0.884 | D | 0.451 | neutral | D | 0.529211162 | None | None | N |
K/R | 0.0889 | likely_benign | 0.0953 | benign | -0.249 | Destabilizing | 0.007 | N | 0.183 | neutral | N | 0.493076297 | None | None | N |
K/S | 0.3951 | ambiguous | 0.4952 | ambiguous | -0.773 | Destabilizing | 0.742 | D | 0.366 | neutral | None | None | None | None | N |
K/T | 0.1758 | likely_benign | 0.2085 | benign | -0.478 | Destabilizing | 0.684 | D | 0.465 | neutral | N | 0.494886723 | None | None | N |
K/V | 0.3629 | ambiguous | 0.4157 | ambiguous | 0.097 | Stabilizing | 0.854 | D | 0.542 | neutral | None | None | None | None | N |
K/W | 0.787 | likely_pathogenic | 0.8257 | pathogenic | -0.149 | Destabilizing | 0.996 | D | 0.636 | neutral | None | None | None | None | N |
K/Y | 0.5794 | likely_pathogenic | 0.6544 | pathogenic | 0.138 | Stabilizing | 0.984 | D | 0.557 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.