Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6487 | 19684;19685;19686 | chr2:178728365;178728364;178728363 | chr2:179593092;179593091;179593090 |
N2AB | 6170 | 18733;18734;18735 | chr2:178728365;178728364;178728363 | chr2:179593092;179593091;179593090 |
N2A | 5243 | 15952;15953;15954 | chr2:178728365;178728364;178728363 | chr2:179593092;179593091;179593090 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.999 | N | 0.544 | 0.21 | 0.283371740733 | gnomAD-4.0.0 | 6.89078E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.02773E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8764 | likely_pathogenic | 0.8929 | pathogenic | -1.919 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
L/C | 0.9533 | likely_pathogenic | 0.9612 | pathogenic | -1.203 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
L/D | 0.9962 | likely_pathogenic | 0.9945 | pathogenic | -1.237 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
L/E | 0.9796 | likely_pathogenic | 0.9734 | pathogenic | -1.225 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
L/F | 0.6395 | likely_pathogenic | 0.6392 | pathogenic | -1.475 | Destabilizing | 1.0 | D | 0.747 | deleterious | N | 0.48643703 | None | None | N |
L/G | 0.9773 | likely_pathogenic | 0.9767 | pathogenic | -2.269 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
L/H | 0.9687 | likely_pathogenic | 0.9595 | pathogenic | -1.462 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
L/I | 0.1948 | likely_benign | 0.2181 | benign | -1.012 | Destabilizing | 0.999 | D | 0.544 | neutral | N | 0.463368797 | None | None | N |
L/K | 0.9728 | likely_pathogenic | 0.9619 | pathogenic | -1.171 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
L/M | 0.2205 | likely_benign | 0.2484 | benign | -0.721 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
L/N | 0.9718 | likely_pathogenic | 0.9683 | pathogenic | -0.949 | Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | N |
L/P | 0.7873 | likely_pathogenic | 0.7617 | pathogenic | -1.284 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
L/Q | 0.922 | likely_pathogenic | 0.9069 | pathogenic | -1.139 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
L/R | 0.9581 | likely_pathogenic | 0.9398 | pathogenic | -0.586 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
L/S | 0.9766 | likely_pathogenic | 0.9773 | pathogenic | -1.648 | Destabilizing | 1.0 | D | 0.858 | deleterious | N | 0.501009339 | None | None | N |
L/T | 0.9091 | likely_pathogenic | 0.9171 | pathogenic | -1.511 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
L/V | 0.2689 | likely_benign | 0.3115 | benign | -1.284 | Destabilizing | 0.999 | D | 0.529 | neutral | N | 0.497286356 | None | None | N |
L/W | 0.9213 | likely_pathogenic | 0.894 | pathogenic | -1.515 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
L/Y | 0.9543 | likely_pathogenic | 0.9469 | pathogenic | -1.303 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.