Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6489 | 19690;19691;19692 | chr2:178728359;178728358;178728357 | chr2:179593086;179593085;179593084 |
N2AB | 6172 | 18739;18740;18741 | chr2:178728359;178728358;178728357 | chr2:179593086;179593085;179593084 |
N2A | 5245 | 15958;15959;15960 | chr2:178728359;178728358;178728357 | chr2:179593086;179593085;179593084 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.134 | N | 0.116 | 0.078 | 0.1749357433 | gnomAD-4.0.0 | 1.61465E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.47189E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2771 | likely_benign | 0.2872 | benign | -0.093 | Destabilizing | 0.863 | D | 0.31 | neutral | None | None | None | None | N |
K/C | 0.7965 | likely_pathogenic | 0.8218 | pathogenic | -0.123 | Destabilizing | 0.999 | D | 0.393 | neutral | None | None | None | None | N |
K/D | 0.4605 | ambiguous | 0.4801 | ambiguous | 0.053 | Stabilizing | 0.02 | N | 0.132 | neutral | None | None | None | None | N |
K/E | 0.1659 | likely_benign | 0.1659 | benign | 0.08 | Stabilizing | 0.134 | N | 0.116 | neutral | N | 0.408299884 | None | None | N |
K/F | 0.8114 | likely_pathogenic | 0.8373 | pathogenic | -0.159 | Destabilizing | 0.997 | D | 0.381 | neutral | None | None | None | None | N |
K/G | 0.4002 | ambiguous | 0.4071 | ambiguous | -0.344 | Destabilizing | 0.969 | D | 0.317 | neutral | None | None | None | None | N |
K/H | 0.36 | ambiguous | 0.3908 | ambiguous | -0.686 | Destabilizing | 0.997 | D | 0.403 | neutral | None | None | None | None | N |
K/I | 0.4334 | ambiguous | 0.4544 | ambiguous | 0.505 | Stabilizing | 0.996 | D | 0.388 | neutral | N | 0.456412903 | None | None | N |
K/L | 0.4166 | ambiguous | 0.4391 | ambiguous | 0.505 | Stabilizing | 0.969 | D | 0.36 | neutral | None | None | None | None | N |
K/M | 0.2776 | likely_benign | 0.2955 | benign | 0.347 | Stabilizing | 0.999 | D | 0.393 | neutral | None | None | None | None | N |
K/N | 0.3432 | ambiguous | 0.3865 | ambiguous | 0.185 | Stabilizing | 0.92 | D | 0.311 | neutral | N | 0.42496006 | None | None | N |
K/P | 0.4838 | ambiguous | 0.4914 | ambiguous | 0.335 | Stabilizing | 0.046 | N | 0.173 | neutral | None | None | None | None | N |
K/Q | 0.1355 | likely_benign | 0.1419 | benign | 0.016 | Stabilizing | 0.92 | D | 0.381 | neutral | N | 0.480450771 | None | None | N |
K/R | 0.0872 | likely_benign | 0.0856 | benign | -0.138 | Destabilizing | 0.92 | D | 0.343 | neutral | N | 0.498689815 | None | None | N |
K/S | 0.3319 | likely_benign | 0.3657 | ambiguous | -0.335 | Destabilizing | 0.863 | D | 0.283 | neutral | None | None | None | None | N |
K/T | 0.1606 | likely_benign | 0.1756 | benign | -0.144 | Destabilizing | 0.959 | D | 0.329 | neutral | N | 0.4559764 | None | None | N |
K/V | 0.3386 | likely_benign | 0.3562 | ambiguous | 0.335 | Stabilizing | 0.969 | D | 0.365 | neutral | None | None | None | None | N |
K/W | 0.8201 | likely_pathogenic | 0.8334 | pathogenic | -0.131 | Destabilizing | 0.999 | D | 0.517 | neutral | None | None | None | None | N |
K/Y | 0.6776 | likely_pathogenic | 0.6909 | pathogenic | 0.199 | Stabilizing | 0.997 | D | 0.378 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.