Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6497 | 19714;19715;19716 | chr2:178728335;178728334;178728333 | chr2:179593062;179593061;179593060 |
N2AB | 6180 | 18763;18764;18765 | chr2:178728335;178728334;178728333 | chr2:179593062;179593061;179593060 |
N2A | 5253 | 15982;15983;15984 | chr2:178728335;178728334;178728333 | chr2:179593062;179593061;179593060 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | 0.999 | N | 0.344 | 0.36 | 0.400468435593 | gnomAD-4.0.0 | 2.74095E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 3.49284E-05 | 1.65926E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0766 | likely_benign | 0.0826 | benign | -0.616 | Destabilizing | 0.826 | D | 0.331 | neutral | N | 0.463645059 | None | None | N |
S/C | 0.1604 | likely_benign | 0.1801 | benign | -0.372 | Destabilizing | 0.999 | D | 0.344 | neutral | N | 0.491664042 | None | None | N |
S/D | 0.3424 | ambiguous | 0.4068 | ambiguous | -0.024 | Destabilizing | 0.884 | D | 0.231 | neutral | None | None | None | None | N |
S/E | 0.4584 | ambiguous | 0.5361 | ambiguous | -0.07 | Destabilizing | 0.939 | D | 0.227 | neutral | None | None | None | None | N |
S/F | 0.1871 | likely_benign | 0.1992 | benign | -1.017 | Destabilizing | 0.015 | N | 0.233 | neutral | N | 0.46145624 | None | None | N |
S/G | 0.1146 | likely_benign | 0.1228 | benign | -0.809 | Destabilizing | 0.863 | D | 0.279 | neutral | None | None | None | None | N |
S/H | 0.3076 | likely_benign | 0.3723 | ambiguous | -1.326 | Destabilizing | 0.991 | D | 0.365 | neutral | None | None | None | None | N |
S/I | 0.1886 | likely_benign | 0.2063 | benign | -0.224 | Destabilizing | 0.939 | D | 0.361 | neutral | None | None | None | None | N |
S/K | 0.5376 | ambiguous | 0.643 | pathogenic | -0.593 | Destabilizing | 0.939 | D | 0.226 | neutral | None | None | None | None | N |
S/L | 0.1016 | likely_benign | 0.1115 | benign | -0.224 | Destabilizing | 0.759 | D | 0.376 | neutral | None | None | None | None | N |
S/M | 0.2306 | likely_benign | 0.2515 | benign | 0.114 | Stabilizing | 0.997 | D | 0.359 | neutral | None | None | None | None | N |
S/N | 0.1426 | likely_benign | 0.1653 | benign | -0.431 | Destabilizing | 0.17 | N | 0.135 | neutral | None | None | None | None | N |
S/P | 0.1178 | likely_benign | 0.1569 | benign | -0.323 | Destabilizing | 0.996 | D | 0.372 | neutral | N | 0.453894915 | None | None | N |
S/Q | 0.4298 | ambiguous | 0.5164 | ambiguous | -0.638 | Destabilizing | 0.991 | D | 0.362 | neutral | None | None | None | None | N |
S/R | 0.4473 | ambiguous | 0.5314 | ambiguous | -0.427 | Destabilizing | 0.991 | D | 0.375 | neutral | None | None | None | None | N |
S/T | 0.0801 | likely_benign | 0.0867 | benign | -0.5 | Destabilizing | 0.134 | N | 0.101 | neutral | N | 0.50228748 | None | None | N |
S/V | 0.1723 | likely_benign | 0.1868 | benign | -0.323 | Destabilizing | 0.939 | D | 0.357 | neutral | None | None | None | None | N |
S/W | 0.3174 | likely_benign | 0.3376 | benign | -0.985 | Destabilizing | 0.999 | D | 0.416 | neutral | None | None | None | None | N |
S/Y | 0.1804 | likely_benign | 0.1948 | benign | -0.721 | Destabilizing | 0.953 | D | 0.401 | neutral | N | 0.496183493 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.