Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6499 | 19720;19721;19722 | chr2:178728329;178728328;178728327 | chr2:179593056;179593055;179593054 |
N2AB | 6182 | 18769;18770;18771 | chr2:178728329;178728328;178728327 | chr2:179593056;179593055;179593054 |
N2A | 5255 | 15988;15989;15990 | chr2:178728329;178728328;178728327 | chr2:179593056;179593055;179593054 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/L | rs375173049 | 1.104 | 0.055 | N | 0.516 | 0.212 | None | gnomAD-2.1.1 | 3.25E-05 | None | None | None | None | N | None | 3.74251E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
H/L | rs375173049 | 1.104 | 0.055 | N | 0.516 | 0.212 | None | gnomAD-3.1.2 | 1.18312E-04 | None | None | None | None | N | None | 4.34363E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
H/L | rs375173049 | 1.104 | 0.055 | N | 0.516 | 0.212 | None | gnomAD-4.0.0 | 1.79944E-05 | None | None | None | None | N | None | 3.87545E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1464 | likely_benign | 0.1704 | benign | -0.009 | Destabilizing | 0.016 | N | 0.488 | neutral | None | None | None | None | N |
H/C | 0.1129 | likely_benign | 0.1512 | benign | 0.629 | Stabilizing | 0.864 | D | 0.587 | neutral | None | None | None | None | N |
H/D | 0.1268 | likely_benign | 0.1417 | benign | 0.021 | Stabilizing | 0.055 | N | 0.49 | neutral | N | 0.426501642 | None | None | N |
H/E | 0.1443 | likely_benign | 0.1652 | benign | 0.054 | Stabilizing | 0.016 | N | 0.417 | neutral | None | None | None | None | N |
H/F | 0.2167 | likely_benign | 0.2514 | benign | 0.657 | Stabilizing | 0.356 | N | 0.583 | neutral | None | None | None | None | N |
H/G | 0.188 | likely_benign | 0.2141 | benign | -0.309 | Destabilizing | 0.072 | N | 0.532 | neutral | None | None | None | None | N |
H/I | 0.1629 | likely_benign | 0.1952 | benign | 0.769 | Stabilizing | 0.356 | N | 0.601 | neutral | None | None | None | None | N |
H/K | 0.1207 | likely_benign | 0.1417 | benign | 0.016 | Stabilizing | 0.016 | N | 0.467 | neutral | None | None | None | None | N |
H/L | 0.0802 | likely_benign | 0.0823 | benign | 0.769 | Stabilizing | 0.055 | N | 0.516 | neutral | N | 0.41245491 | None | None | N |
H/M | 0.2917 | likely_benign | 0.3434 | ambiguous | 0.631 | Stabilizing | 0.356 | N | 0.582 | neutral | None | None | None | None | N |
H/N | 0.0699 | likely_benign | 0.0764 | benign | 0.132 | Stabilizing | 0.055 | N | 0.505 | neutral | N | 0.41601529 | None | None | N |
H/P | 0.2087 | likely_benign | 0.1952 | benign | 0.535 | Stabilizing | 0.106 | N | 0.602 | neutral | N | 0.453032315 | None | None | N |
H/Q | 0.0832 | likely_benign | 0.0932 | benign | 0.237 | Stabilizing | None | N | 0.265 | neutral | N | 0.371744438 | None | None | N |
H/R | 0.0586 | likely_benign | 0.0632 | benign | -0.508 | Destabilizing | None | N | 0.242 | neutral | N | 0.406259656 | None | None | N |
H/S | 0.1223 | likely_benign | 0.1383 | benign | 0.161 | Stabilizing | 0.016 | N | 0.475 | neutral | None | None | None | None | N |
H/T | 0.1161 | likely_benign | 0.1448 | benign | 0.29 | Stabilizing | 0.072 | N | 0.549 | neutral | None | None | None | None | N |
H/V | 0.1376 | likely_benign | 0.1539 | benign | 0.535 | Stabilizing | 0.072 | N | 0.569 | neutral | None | None | None | None | N |
H/W | 0.2805 | likely_benign | 0.315 | benign | 0.717 | Stabilizing | 0.864 | D | 0.584 | neutral | None | None | None | None | N |
H/Y | 0.0839 | likely_benign | 0.0891 | benign | 0.997 | Stabilizing | 0.106 | N | 0.503 | neutral | N | 0.45336017 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.