Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6500 | 19723;19724;19725 | chr2:178728326;178728325;178728324 | chr2:179593053;179593052;179593051 |
N2AB | 6183 | 18772;18773;18774 | chr2:178728326;178728325;178728324 | chr2:179593053;179593052;179593051 |
N2A | 5256 | 15991;15992;15993 | chr2:178728326;178728325;178728324 | chr2:179593053;179593052;179593051 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/V | None | None | 0.007 | N | 0.389 | 0.32 | 0.42538462244 | gnomAD-4.0.0 | 1.59478E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86192E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.8167 | likely_pathogenic | 0.8882 | pathogenic | -2.369 | Highly Destabilizing | 0.228 | N | 0.565 | neutral | None | None | None | None | N |
M/C | 0.9461 | likely_pathogenic | 0.9658 | pathogenic | -2.147 | Highly Destabilizing | 0.94 | D | 0.753 | deleterious | None | None | None | None | N |
M/D | 0.996 | likely_pathogenic | 0.9979 | pathogenic | -2.193 | Highly Destabilizing | 0.94 | D | 0.802 | deleterious | None | None | None | None | N |
M/E | 0.9659 | likely_pathogenic | 0.9808 | pathogenic | -1.969 | Destabilizing | 0.816 | D | 0.731 | prob.delet. | None | None | None | None | N |
M/F | 0.364 | ambiguous | 0.3893 | ambiguous | -1.106 | Destabilizing | 0.418 | N | 0.571 | neutral | None | None | None | None | N |
M/G | 0.9489 | likely_pathogenic | 0.9701 | pathogenic | -2.799 | Highly Destabilizing | 0.593 | D | 0.739 | prob.delet. | None | None | None | None | N |
M/H | 0.9579 | likely_pathogenic | 0.9761 | pathogenic | -2.312 | Highly Destabilizing | 0.983 | D | 0.839 | deleterious | None | None | None | None | N |
M/I | 0.5334 | ambiguous | 0.643 | pathogenic | -1.112 | Destabilizing | None | N | 0.249 | neutral | N | 0.453769254 | None | None | N |
M/K | 0.8346 | likely_pathogenic | 0.8878 | pathogenic | -1.351 | Destabilizing | 0.523 | D | 0.611 | neutral | N | 0.505647144 | None | None | N |
M/L | 0.1228 | likely_benign | 0.1533 | benign | -1.112 | Destabilizing | None | N | 0.236 | neutral | N | 0.340664674 | None | None | N |
M/N | 0.9779 | likely_pathogenic | 0.988 | pathogenic | -1.739 | Destabilizing | 0.94 | D | 0.779 | deleterious | None | None | None | None | N |
M/P | 0.9918 | likely_pathogenic | 0.9953 | pathogenic | -1.519 | Destabilizing | 0.94 | D | 0.779 | deleterious | None | None | None | None | N |
M/Q | 0.8588 | likely_pathogenic | 0.9056 | pathogenic | -1.485 | Destabilizing | 0.94 | D | 0.63 | neutral | None | None | None | None | N |
M/R | 0.8275 | likely_pathogenic | 0.8903 | pathogenic | -1.431 | Destabilizing | 0.921 | D | 0.697 | prob.neutral | N | 0.505647144 | None | None | N |
M/S | 0.9329 | likely_pathogenic | 0.9633 | pathogenic | -2.223 | Highly Destabilizing | 0.593 | D | 0.613 | neutral | None | None | None | None | N |
M/T | 0.7452 | likely_pathogenic | 0.851 | pathogenic | -1.881 | Destabilizing | 0.183 | N | 0.601 | neutral | N | 0.494037349 | None | None | N |
M/V | 0.1761 | likely_benign | 0.223 | benign | -1.519 | Destabilizing | 0.007 | N | 0.389 | neutral | N | 0.484900238 | None | None | N |
M/W | 0.8353 | likely_pathogenic | 0.8813 | pathogenic | -1.341 | Destabilizing | 0.983 | D | 0.746 | deleterious | None | None | None | None | N |
M/Y | 0.86 | likely_pathogenic | 0.8937 | pathogenic | -1.338 | Destabilizing | 0.836 | D | 0.707 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.