Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6503 | 19732;19733;19734 | chr2:178728317;178728316;178728315 | chr2:179593044;179593043;179593042 |
N2AB | 6186 | 18781;18782;18783 | chr2:178728317;178728316;178728315 | chr2:179593044;179593043;179593042 |
N2A | 5259 | 16000;16001;16002 | chr2:178728317;178728316;178728315 | chr2:179593044;179593043;179593042 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.338 | N | 0.48 | 0.234 | 0.258283824007 | gnomAD-4.0.0 | 1.59321E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43373E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3474 | ambiguous | 0.3965 | ambiguous | -0.662 | Destabilizing | 0.404 | N | 0.535 | neutral | None | None | None | None | N |
K/C | 0.7841 | likely_pathogenic | 0.8127 | pathogenic | -0.739 | Destabilizing | 0.973 | D | 0.7 | prob.neutral | None | None | None | None | N |
K/D | 0.5735 | likely_pathogenic | 0.6404 | pathogenic | -0.332 | Destabilizing | 0.826 | D | 0.661 | neutral | None | None | None | None | N |
K/E | 0.1626 | likely_benign | 0.1967 | benign | -0.216 | Destabilizing | 0.338 | N | 0.48 | neutral | N | 0.493866438 | None | None | N |
K/F | 0.743 | likely_pathogenic | 0.75 | pathogenic | -0.373 | Destabilizing | 0.906 | D | 0.718 | prob.delet. | None | None | None | None | N |
K/G | 0.5608 | ambiguous | 0.6169 | pathogenic | -1.036 | Destabilizing | 0.575 | D | 0.655 | neutral | None | None | None | None | N |
K/H | 0.314 | likely_benign | 0.3126 | benign | -1.392 | Destabilizing | 0.973 | D | 0.684 | prob.neutral | None | None | None | None | N |
K/I | 0.2501 | likely_benign | 0.2964 | benign | 0.311 | Stabilizing | 0.704 | D | 0.723 | prob.delet. | None | None | None | None | N |
K/L | 0.3487 | ambiguous | 0.379 | ambiguous | 0.311 | Stabilizing | 0.404 | N | 0.645 | neutral | None | None | None | None | N |
K/M | 0.1924 | likely_benign | 0.2184 | benign | 0.256 | Stabilizing | 0.965 | D | 0.685 | prob.neutral | N | 0.490077784 | None | None | N |
K/N | 0.4021 | ambiguous | 0.4709 | ambiguous | -0.635 | Destabilizing | 0.782 | D | 0.567 | neutral | D | 0.534771698 | None | None | N |
K/P | 0.8671 | likely_pathogenic | 0.9 | pathogenic | 0.017 | Stabilizing | 0.906 | D | 0.696 | prob.neutral | None | None | None | None | N |
K/Q | 0.1347 | likely_benign | 0.1473 | benign | -0.728 | Destabilizing | 0.084 | N | 0.363 | neutral | N | 0.488556619 | None | None | N |
K/R | 0.0877 | likely_benign | 0.0881 | benign | -0.687 | Destabilizing | 0.505 | D | 0.461 | neutral | N | 0.468432062 | None | None | N |
K/S | 0.4018 | ambiguous | 0.4607 | ambiguous | -1.308 | Destabilizing | 0.404 | N | 0.479 | neutral | None | None | None | None | N |
K/T | 0.1419 | likely_benign | 0.1711 | benign | -0.982 | Destabilizing | 0.003 | N | 0.436 | neutral | N | 0.50862246 | None | None | N |
K/V | 0.2569 | likely_benign | 0.2936 | benign | 0.017 | Stabilizing | 0.704 | D | 0.667 | neutral | None | None | None | None | N |
K/W | 0.7891 | likely_pathogenic | 0.7716 | pathogenic | -0.244 | Destabilizing | 0.991 | D | 0.677 | prob.neutral | None | None | None | None | N |
K/Y | 0.6256 | likely_pathogenic | 0.6355 | pathogenic | 0.067 | Stabilizing | 0.906 | D | 0.718 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.