Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6504 | 19735;19736;19737 | chr2:178728314;178728313;178728312 | chr2:179593041;179593040;179593039 |
N2AB | 6187 | 18784;18785;18786 | chr2:178728314;178728313;178728312 | chr2:179593041;179593040;179593039 |
N2A | 5260 | 16003;16004;16005 | chr2:178728314;178728313;178728312 | chr2:179593041;179593040;179593039 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs762156103 | -0.398 | 0.031 | D | 0.459 | 0.418 | 0.305730143919 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.96E-06 | 0 |
V/L | rs762156103 | -0.398 | 0.031 | D | 0.459 | 0.418 | 0.305730143919 | gnomAD-4.0.0 | 6.84548E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52372E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5255 | ambiguous | 0.5149 | ambiguous | -1.942 | Destabilizing | 0.296 | N | 0.685 | prob.neutral | N | 0.519138602 | None | None | N |
V/C | 0.9347 | likely_pathogenic | 0.9187 | pathogenic | -2.004 | Highly Destabilizing | 0.991 | D | 0.761 | deleterious | None | None | None | None | N |
V/D | 0.9606 | likely_pathogenic | 0.9577 | pathogenic | -2.033 | Highly Destabilizing | 0.906 | D | 0.858 | deleterious | None | None | None | None | N |
V/E | 0.9215 | likely_pathogenic | 0.9169 | pathogenic | -1.883 | Destabilizing | 0.879 | D | 0.834 | deleterious | D | 0.635680672 | None | None | N |
V/F | 0.322 | likely_benign | 0.242 | benign | -1.311 | Destabilizing | 0.826 | D | 0.809 | deleterious | None | None | None | None | N |
V/G | 0.6395 | likely_pathogenic | 0.6118 | pathogenic | -2.41 | Highly Destabilizing | 0.879 | D | 0.853 | deleterious | D | 0.590408565 | None | None | N |
V/H | 0.9704 | likely_pathogenic | 0.9637 | pathogenic | -1.983 | Destabilizing | 0.991 | D | 0.835 | deleterious | None | None | None | None | N |
V/I | 0.1018 | likely_benign | 0.0966 | benign | -0.674 | Destabilizing | 0.002 | N | 0.207 | neutral | None | None | None | None | N |
V/K | 0.9532 | likely_pathogenic | 0.95 | pathogenic | -1.512 | Destabilizing | 0.906 | D | 0.836 | deleterious | None | None | None | None | N |
V/L | 0.3111 | likely_benign | 0.2934 | benign | -0.674 | Destabilizing | 0.031 | N | 0.459 | neutral | D | 0.558178757 | None | None | N |
V/M | 0.358 | ambiguous | 0.3423 | ambiguous | -0.922 | Destabilizing | 0.782 | D | 0.725 | prob.delet. | D | 0.619257703 | None | None | N |
V/N | 0.9232 | likely_pathogenic | 0.9206 | pathogenic | -1.678 | Destabilizing | 0.967 | D | 0.848 | deleterious | None | None | None | None | N |
V/P | 0.9325 | likely_pathogenic | 0.9344 | pathogenic | -1.067 | Destabilizing | 0.967 | D | 0.819 | deleterious | None | None | None | None | N |
V/Q | 0.9239 | likely_pathogenic | 0.9223 | pathogenic | -1.642 | Destabilizing | 0.967 | D | 0.824 | deleterious | None | None | None | None | N |
V/R | 0.925 | likely_pathogenic | 0.9162 | pathogenic | -1.266 | Destabilizing | 0.906 | D | 0.847 | deleterious | None | None | None | None | N |
V/S | 0.8088 | likely_pathogenic | 0.7961 | pathogenic | -2.4 | Highly Destabilizing | 0.906 | D | 0.819 | deleterious | None | None | None | None | N |
V/T | 0.7197 | likely_pathogenic | 0.7142 | pathogenic | -2.104 | Highly Destabilizing | 0.575 | D | 0.692 | prob.neutral | None | None | None | None | N |
V/W | 0.9581 | likely_pathogenic | 0.9292 | pathogenic | -1.613 | Destabilizing | 0.991 | D | 0.818 | deleterious | None | None | None | None | N |
V/Y | 0.8377 | likely_pathogenic | 0.7611 | pathogenic | -1.275 | Destabilizing | 0.906 | D | 0.784 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.