Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6506 | 19741;19742;19743 | chr2:178728308;178728307;178728306 | chr2:179593035;179593034;179593033 |
N2AB | 6189 | 18790;18791;18792 | chr2:178728308;178728307;178728306 | chr2:179593035;179593034;179593033 |
N2A | 5262 | 16009;16010;16011 | chr2:178728308;178728307;178728306 | chr2:179593035;179593034;179593033 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | rs1401335381 | -0.042 | 1.0 | D | 0.814 | 0.783 | 0.594932130068 | gnomAD-2.1.1 | 8.08E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.79E-05 | 0 |
G/D | rs1401335381 | -0.042 | 1.0 | D | 0.814 | 0.783 | 0.594932130068 | gnomAD-4.0.0 | 2.05353E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69905E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.7746 | likely_pathogenic | 0.6636 | pathogenic | -0.212 | Destabilizing | 1.0 | D | 0.782 | deleterious | D | 0.576001844 | None | None | I |
G/C | 0.9715 | likely_pathogenic | 0.936 | pathogenic | -0.878 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | D | 0.63861486 | None | None | I |
G/D | 0.9885 | likely_pathogenic | 0.9742 | pathogenic | -0.171 | Destabilizing | 1.0 | D | 0.814 | deleterious | D | 0.577969884 | None | None | I |
G/E | 0.9916 | likely_pathogenic | 0.9774 | pathogenic | -0.304 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
G/F | 0.995 | likely_pathogenic | 0.9878 | pathogenic | -0.796 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | I |
G/H | 0.9966 | likely_pathogenic | 0.9917 | pathogenic | -0.549 | Destabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | I |
G/I | 0.9873 | likely_pathogenic | 0.9667 | pathogenic | -0.205 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | I |
G/K | 0.9955 | likely_pathogenic | 0.9898 | pathogenic | -0.729 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | I |
G/L | 0.9914 | likely_pathogenic | 0.9813 | pathogenic | -0.205 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | I |
G/M | 0.9963 | likely_pathogenic | 0.9902 | pathogenic | -0.384 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
G/N | 0.9925 | likely_pathogenic | 0.983 | pathogenic | -0.379 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | I |
G/P | 0.997 | likely_pathogenic | 0.994 | pathogenic | -0.171 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | I |
G/Q | 0.9934 | likely_pathogenic | 0.9847 | pathogenic | -0.589 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
G/R | 0.9816 | likely_pathogenic | 0.9612 | pathogenic | -0.409 | Destabilizing | 1.0 | D | 0.797 | deleterious | D | 0.598511096 | None | None | I |
G/S | 0.8105 | likely_pathogenic | 0.669 | pathogenic | -0.618 | Destabilizing | 1.0 | D | 0.829 | deleterious | D | 0.573992724 | None | None | I |
G/T | 0.9687 | likely_pathogenic | 0.9263 | pathogenic | -0.66 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | I |
G/V | 0.9696 | likely_pathogenic | 0.9243 | pathogenic | -0.171 | Destabilizing | 1.0 | D | 0.757 | deleterious | D | 0.654230613 | None | None | I |
G/W | 0.9909 | likely_pathogenic | 0.9756 | pathogenic | -1.001 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | I |
G/Y | 0.9949 | likely_pathogenic | 0.9854 | pathogenic | -0.611 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.