Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6509 | 19750;19751;19752 | chr2:178728299;178728298;178728297 | chr2:179593026;179593025;179593024 |
N2AB | 6192 | 18799;18800;18801 | chr2:178728299;178728298;178728297 | chr2:179593026;179593025;179593024 |
N2A | 5265 | 16018;16019;16020 | chr2:178728299;178728298;178728297 | chr2:179593026;179593025;179593024 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.967 | N | 0.671 | 0.531 | 0.698156398671 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
P/S | rs764314153 | -0.896 | 0.892 | N | 0.526 | 0.519 | 0.479056812784 | gnomAD-2.1.1 | 8.08E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.79E-05 | 0 |
P/S | rs764314153 | -0.896 | 0.892 | N | 0.526 | 0.519 | 0.479056812784 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.77555E-04 |
P/S | rs764314153 | -0.896 | 0.892 | N | 0.526 | 0.519 | 0.479056812784 | gnomAD-4.0.0 | 3.09976E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54342E-06 | 1.09837E-05 | 1.60226E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.5325 | ambiguous | 0.458 | ambiguous | -0.404 | Destabilizing | 0.892 | D | 0.515 | neutral | N | 0.503290059 | None | None | I |
P/C | 0.9537 | likely_pathogenic | 0.9366 | pathogenic | -0.733 | Destabilizing | 0.999 | D | 0.718 | prob.delet. | None | None | None | None | I |
P/D | 0.8552 | likely_pathogenic | 0.8059 | pathogenic | -0.044 | Destabilizing | 0.975 | D | 0.508 | neutral | None | None | None | None | I |
P/E | 0.7998 | likely_pathogenic | 0.7315 | pathogenic | -0.145 | Destabilizing | 0.845 | D | 0.551 | neutral | None | None | None | None | I |
P/F | 0.9525 | likely_pathogenic | 0.9249 | pathogenic | -0.582 | Destabilizing | 0.997 | D | 0.683 | prob.neutral | None | None | None | None | I |
P/G | 0.781 | likely_pathogenic | 0.7563 | pathogenic | -0.526 | Destabilizing | 0.975 | D | 0.587 | neutral | None | None | None | None | I |
P/H | 0.7744 | likely_pathogenic | 0.7024 | pathogenic | -0.052 | Destabilizing | 0.12 | N | 0.531 | neutral | D | 0.539297986 | None | None | I |
P/I | 0.9079 | likely_pathogenic | 0.8793 | pathogenic | -0.229 | Destabilizing | 0.987 | D | 0.696 | prob.neutral | None | None | None | None | I |
P/K | 0.8738 | likely_pathogenic | 0.843 | pathogenic | -0.385 | Destabilizing | 0.845 | D | 0.52 | neutral | None | None | None | None | I |
P/L | 0.6373 | likely_pathogenic | 0.5447 | ambiguous | -0.229 | Destabilizing | 0.967 | D | 0.671 | neutral | N | 0.499037325 | None | None | I |
P/M | 0.8944 | likely_pathogenic | 0.8611 | pathogenic | -0.447 | Destabilizing | 0.999 | D | 0.648 | neutral | None | None | None | None | I |
P/N | 0.8301 | likely_pathogenic | 0.7851 | pathogenic | -0.186 | Destabilizing | 0.975 | D | 0.654 | neutral | None | None | None | None | I |
P/Q | 0.7178 | likely_pathogenic | 0.6454 | pathogenic | -0.373 | Destabilizing | 0.496 | N | 0.471 | neutral | None | None | None | None | I |
P/R | 0.7568 | likely_pathogenic | 0.694 | pathogenic | 0.063 | Stabilizing | 0.967 | D | 0.655 | neutral | N | 0.499860245 | None | None | I |
P/S | 0.6662 | likely_pathogenic | 0.5855 | pathogenic | -0.576 | Destabilizing | 0.892 | D | 0.526 | neutral | N | 0.49498517399999997 | None | None | I |
P/T | 0.6219 | likely_pathogenic | 0.557 | ambiguous | -0.571 | Destabilizing | 0.983 | D | 0.518 | neutral | N | 0.48738785 | None | None | I |
P/V | 0.8138 | likely_pathogenic | 0.7715 | pathogenic | -0.254 | Destabilizing | 0.987 | D | 0.643 | neutral | None | None | None | None | I |
P/W | 0.9735 | likely_pathogenic | 0.9584 | pathogenic | -0.657 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | I |
P/Y | 0.9312 | likely_pathogenic | 0.9017 | pathogenic | -0.368 | Destabilizing | 0.95 | D | 0.696 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.