Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6514 | 19765;19766;19767 | chr2:178728284;178728283;178728282 | chr2:179593011;179593010;179593009 |
N2AB | 6197 | 18814;18815;18816 | chr2:178728284;178728283;178728282 | chr2:179593011;179593010;179593009 |
N2A | 5270 | 16033;16034;16035 | chr2:178728284;178728283;178728282 | chr2:179593011;179593010;179593009 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
W/C | None | None | 0.056 | D | 0.76 | 0.889 | 0.887458683018 | gnomAD-4.0.0 | 4.79107E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.2976E-06 | 0 | 0 |
W/L | rs760007747 | -1.991 | 0.805 | D | 0.802 | 0.781 | None | gnomAD-2.1.1 | 2.51E-05 | None | None | None | None | N | None | 4.14E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 4.71E-05 | 0 |
W/L | rs760007747 | -1.991 | 0.805 | D | 0.802 | 0.781 | None | gnomAD-3.1.2 | 5.26E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 8.82E-05 | 0 | 0 |
W/L | rs760007747 | -1.991 | 0.805 | D | 0.802 | 0.781 | None | gnomAD-4.0.0 | 5.20729E-05 | None | None | None | None | N | None | 2.67144E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 6.69755E-05 | 0 | 4.80615E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
W/A | 0.984 | likely_pathogenic | 0.9879 | pathogenic | -3.05 | Highly Destabilizing | 0.845 | D | 0.824 | deleterious | None | None | None | None | N |
W/C | 0.9908 | likely_pathogenic | 0.9935 | pathogenic | -1.54 | Destabilizing | 0.056 | N | 0.76 | deleterious | D | 0.700511641 | None | None | N |
W/D | 0.9988 | likely_pathogenic | 0.9987 | pathogenic | -3.547 | Highly Destabilizing | 0.996 | D | 0.857 | deleterious | None | None | None | None | N |
W/E | 0.9986 | likely_pathogenic | 0.9987 | pathogenic | -3.431 | Highly Destabilizing | 0.996 | D | 0.861 | deleterious | None | None | None | None | N |
W/F | 0.571 | likely_pathogenic | 0.5936 | pathogenic | -1.927 | Destabilizing | 0.987 | D | 0.781 | deleterious | None | None | None | None | N |
W/G | 0.9515 | likely_pathogenic | 0.9615 | pathogenic | -3.282 | Highly Destabilizing | 0.983 | D | 0.813 | deleterious | D | 0.716329197 | None | None | N |
W/H | 0.9942 | likely_pathogenic | 0.9948 | pathogenic | -2.357 | Highly Destabilizing | 0.999 | D | 0.824 | deleterious | None | None | None | None | N |
W/I | 0.9169 | likely_pathogenic | 0.9312 | pathogenic | -2.151 | Highly Destabilizing | 0.975 | D | 0.861 | deleterious | None | None | None | None | N |
W/K | 0.9992 | likely_pathogenic | 0.9993 | pathogenic | -2.448 | Highly Destabilizing | 0.987 | D | 0.858 | deleterious | None | None | None | None | N |
W/L | 0.8411 | likely_pathogenic | 0.8717 | pathogenic | -2.151 | Highly Destabilizing | 0.805 | D | 0.802 | deleterious | D | 0.716329198 | None | None | N |
W/M | 0.9707 | likely_pathogenic | 0.9768 | pathogenic | -1.556 | Destabilizing | 0.999 | D | 0.775 | deleterious | None | None | None | None | N |
W/N | 0.9976 | likely_pathogenic | 0.9979 | pathogenic | -3.179 | Highly Destabilizing | 0.996 | D | 0.871 | deleterious | None | None | None | None | N |
W/P | 0.9976 | likely_pathogenic | 0.9979 | pathogenic | -2.481 | Highly Destabilizing | 0.996 | D | 0.869 | deleterious | None | None | None | None | N |
W/Q | 0.9989 | likely_pathogenic | 0.9992 | pathogenic | -3.008 | Highly Destabilizing | 0.996 | D | 0.858 | deleterious | None | None | None | None | N |
W/R | 0.9983 | likely_pathogenic | 0.9985 | pathogenic | -2.247 | Highly Destabilizing | 0.994 | D | 0.868 | deleterious | D | 0.716531002 | None | None | N |
W/S | 0.9853 | likely_pathogenic | 0.9884 | pathogenic | -3.268 | Highly Destabilizing | 0.967 | D | 0.849 | deleterious | D | 0.716531002 | None | None | N |
W/T | 0.9874 | likely_pathogenic | 0.9901 | pathogenic | -3.077 | Highly Destabilizing | 0.975 | D | 0.807 | deleterious | None | None | None | None | N |
W/V | 0.9263 | likely_pathogenic | 0.944 | pathogenic | -2.481 | Highly Destabilizing | 0.95 | D | 0.843 | deleterious | None | None | None | None | N |
W/Y | 0.8535 | likely_pathogenic | 0.8625 | pathogenic | -1.78 | Destabilizing | 0.996 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.