Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC652919810;19811;19812 chr2:178728239;178728238;178728237chr2:179592966;179592965;179592964
N2AB621218859;18860;18861 chr2:178728239;178728238;178728237chr2:179592966;179592965;179592964
N2A528516078;16079;16080 chr2:178728239;178728238;178728237chr2:179592966;179592965;179592964
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Ig-49
  • Domain position: 49
  • Structural Position: 123
  • Q(SASA): 0.2717
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F rs758456020 -1.228 0.934 N 0.526 0.323 None gnomAD-2.1.1 1.21E-05 None None None None N None 0 0 None 0 0 None 6.54E-05 None 0 8.93E-06 0
L/F rs758456020 -1.228 0.934 N 0.526 0.323 None gnomAD-4.0.0 7.9629E-06 None None None None N None 0 0 None 0 0 None 0 0 5.72118E-06 2.86673E-05 3.02755E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.1451 likely_benign 0.1775 benign -1.937 Destabilizing 0.525 D 0.451 neutral None None None None N
L/C 0.3947 ambiguous 0.4479 ambiguous -1.161 Destabilizing 0.998 D 0.559 neutral None None None None N
L/D 0.4831 ambiguous 0.567 pathogenic -1.466 Destabilizing 0.949 D 0.646 neutral None None None None N
L/E 0.233 likely_benign 0.2844 benign -1.351 Destabilizing 0.949 D 0.635 neutral None None None None N
L/F 0.1026 likely_benign 0.117 benign -1.161 Destabilizing 0.934 D 0.526 neutral N 0.42864431 None None N
L/G 0.3476 ambiguous 0.4113 ambiguous -2.382 Highly Destabilizing 0.728 D 0.61 neutral None None None None N
L/H 0.1461 likely_benign 0.1723 benign -1.679 Destabilizing 0.997 D 0.621 neutral N 0.517034086 None None N
L/I 0.0726 likely_benign 0.0772 benign -0.723 Destabilizing 0.051 N 0.283 neutral N 0.370652012 None None N
L/K 0.183 likely_benign 0.2068 benign -1.325 Destabilizing 0.842 D 0.603 neutral None None None None N
L/M 0.0903 likely_benign 0.0912 benign -0.586 Destabilizing 0.325 N 0.324 neutral None None None None N
L/N 0.2564 likely_benign 0.3033 benign -1.338 Destabilizing 0.949 D 0.634 neutral None None None None N
L/P 0.1521 likely_benign 0.2158 benign -1.1 Destabilizing 0.012 N 0.427 neutral N 0.447808861 None None N
L/Q 0.1172 likely_benign 0.1407 benign -1.348 Destabilizing 0.974 D 0.613 neutral None None None None N
L/R 0.1442 likely_benign 0.1679 benign -0.929 Destabilizing 0.934 D 0.609 neutral N 0.46702934 None None N
L/S 0.1609 likely_benign 0.2027 benign -2.049 Highly Destabilizing 0.067 N 0.38 neutral None None None None N
L/T 0.1156 likely_benign 0.1359 benign -1.798 Destabilizing 0.728 D 0.494 neutral None None None None N
L/V 0.0726 likely_benign 0.0783 benign -1.1 Destabilizing 0.454 N 0.446 neutral N 0.399990698 None None N
L/W 0.1684 likely_benign 0.1827 benign -1.383 Destabilizing 0.998 D 0.631 neutral None None None None N
L/Y 0.2497 likely_benign 0.2743 benign -1.098 Destabilizing 0.991 D 0.579 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.