Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6533 | 19822;19823;19824 | chr2:178728227;178728226;178728225 | chr2:179592954;179592953;179592952 |
N2AB | 6216 | 18871;18872;18873 | chr2:178728227;178728226;178728225 | chr2:179592954;179592953;179592952 |
N2A | 5289 | 16090;16091;16092 | chr2:178728227;178728226;178728225 | chr2:179592954;179592953;179592952 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.061 | N | 0.147 | 0.198 | 0.0482279557977 | gnomAD-4.0.0 | 1.59273E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86089E-06 | 0 | 0 |
E/K | rs886042142 | None | 0.98 | N | 0.377 | 0.245 | 0.241078983079 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs886042142 | None | 0.98 | N | 0.377 | 0.245 | 0.241078983079 | gnomAD-4.0.0 | 1.85978E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54358E-06 | 0 | 0 |
E/Q | None | None | 0.99 | N | 0.35 | 0.246 | 0.15556083564 | gnomAD-4.0.0 | 2.05346E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69921E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2738 | likely_benign | 0.239 | benign | -0.227 | Destabilizing | 0.99 | D | 0.392 | neutral | N | 0.456426129 | None | None | N |
E/C | 0.9258 | likely_pathogenic | 0.8991 | pathogenic | -0.321 | Destabilizing | 1.0 | D | 0.511 | neutral | None | None | None | None | N |
E/D | 0.1151 | likely_benign | 0.1025 | benign | -0.286 | Destabilizing | 0.061 | N | 0.147 | neutral | N | 0.419535598 | None | None | N |
E/F | 0.8742 | likely_pathogenic | 0.8242 | pathogenic | -0.057 | Destabilizing | 0.999 | D | 0.432 | neutral | None | None | None | None | N |
E/G | 0.1342 | likely_benign | 0.1214 | benign | -0.403 | Destabilizing | 0.98 | D | 0.381 | neutral | N | 0.463630305 | None | None | N |
E/H | 0.5905 | likely_pathogenic | 0.5095 | ambiguous | 0.466 | Stabilizing | 0.998 | D | 0.341 | neutral | None | None | None | None | N |
E/I | 0.6844 | likely_pathogenic | 0.5973 | pathogenic | 0.199 | Stabilizing | 0.999 | D | 0.433 | neutral | None | None | None | None | N |
E/K | 0.1949 | likely_benign | 0.1538 | benign | 0.211 | Stabilizing | 0.98 | D | 0.377 | neutral | N | 0.457324729 | None | None | N |
E/L | 0.6248 | likely_pathogenic | 0.5465 | ambiguous | 0.199 | Stabilizing | 0.998 | D | 0.413 | neutral | None | None | None | None | N |
E/M | 0.7049 | likely_pathogenic | 0.6391 | pathogenic | 0.004 | Stabilizing | 1.0 | D | 0.424 | neutral | None | None | None | None | N |
E/N | 0.3081 | likely_benign | 0.2574 | benign | -0.106 | Destabilizing | 0.469 | N | 0.209 | neutral | None | None | None | None | N |
E/P | 0.6122 | likely_pathogenic | 0.548 | ambiguous | 0.076 | Stabilizing | 0.999 | D | 0.353 | neutral | None | None | None | None | N |
E/Q | 0.1966 | likely_benign | 0.1688 | benign | -0.054 | Destabilizing | 0.99 | D | 0.35 | neutral | N | 0.456933108 | None | None | N |
E/R | 0.3368 | likely_benign | 0.2673 | benign | 0.56 | Stabilizing | 0.998 | D | 0.33 | neutral | None | None | None | None | N |
E/S | 0.2653 | likely_benign | 0.2245 | benign | -0.281 | Destabilizing | 0.985 | D | 0.365 | neutral | None | None | None | None | N |
E/T | 0.4177 | ambiguous | 0.3518 | ambiguous | -0.129 | Destabilizing | 0.985 | D | 0.412 | neutral | None | None | None | None | N |
E/V | 0.4773 | ambiguous | 0.4001 | ambiguous | 0.076 | Stabilizing | 0.999 | D | 0.379 | neutral | N | 0.491028478 | None | None | N |
E/W | 0.9386 | likely_pathogenic | 0.899 | pathogenic | 0.074 | Stabilizing | 1.0 | D | 0.577 | neutral | None | None | None | None | N |
E/Y | 0.7487 | likely_pathogenic | 0.6739 | pathogenic | 0.18 | Stabilizing | 0.999 | D | 0.407 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.